Gene RPB_1715 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1715 
Symbol 
ID3908240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1954160 
End bp1954615 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content61% 
IMG OID637883609 
Producthypothetical protein 
Protein accessionYP_485334 
Protein GI86748838 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0227611 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.523463 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCACAA AATTCATATT GGCCGTCGCC GCCGCAGCGA CGGCGCTCAC TATCGTTCCG 
GCCGCCGCCG GCGCCAGCAA GGACGATGCG ATCGCGATGG TGAAGAAAGC CGTCAGTGCG
ATCAAGTCCG ACGGCGCCGA CAAGACCTAT CCGCTGATCA GCGACAAGGC GGGACCGTTC
GTGAAGGACG ATCTCTACGT CGTGGTCTAT CAGCTCGACG GCAAGGTGCT CGCCCATGGC
GCCAATGCCA AGTTCGTCGG CAAGGACATG ATCGACGCGC AGGACGTCGA CGGCAAGCTC
TACGTCAAGG AGCGCGTCGA ACTCGCCGGC AAGCAGCCGT CGTTCTGGCA GGACTACAAG
TTCGTCAATC CGGTCAGCAA GAAAGTCGAA CCCAAGGAAA TGTATTGCGA ACGGGTCGAC
AACACCGCGG TCTGCGCGGG CGTCTACAAA CTCTAG
 
Protein sequence
MRTKFILAVA AAATALTIVP AAAGASKDDA IAMVKKAVSA IKSDGADKTY PLISDKAGPF 
VKDDLYVVVY QLDGKVLAHG ANAKFVGKDM IDAQDVDGKL YVKERVELAG KQPSFWQDYK
FVNPVSKKVE PKEMYCERVD NTAVCAGVYK L