| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1709 |
|---|
| Symbol | |
|---|
| ID | 3908234 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 1944366 |
|---|
| End bp | 1944902 |
|---|
| Gene Length | 537 bp |
|---|
| Protein Length | 178 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637883603 |
|---|
| Product | MarR family transcriptional regulator |
|---|
| Protein accession | YP_485328 |
|---|
| Protein GI | 86748832 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1846] Transcriptional regulators |
|---|
| TIGRFAM ID | [TIGR02337] homoprotocatechuate degradation operon regulator, HpaR |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.592382 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.339139 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCAGGT TCTCGCGCTC CCTGCCGATG GCGCTGCTGC GCGGACGCGA GGCGGTGATG
CGGCATTTCC GGCCGCTACT GCGGGCTCAT GGCCTCAGCG AGCAACAATG GCGGATCCTG
CGGGCGCTCA CCGAGGTCGA GGCGATCGAG GTCACCGAAT TGGCCGACCG CGCTTTCCTG
CTCGGGCCAA GTCTGTCGCG GATGCTGCGC GATTTGGAGG CGCGCAAGTG GATCGCGCGG
AAGCCGGCAA AGGACGATCA GCGGCGCAGC CGGGTGTCGA TCACGCCCAA GGGGCTGAAA
CTGATCGAGA CCGTCGCACC GTTTTCCGAG CAGATCTATG CGGACATCGC TCGTCATTTC
GGTGATGCGA AGCTCGCTGC GCTGCAGGAC ATGTTGGGCG CGCTGGAAGC CGATTTGACG
AGGATGCCGG TGCGGCATGC GGCCGATGCG GTGGACAGCG GACCGGATTT TCGGTCAACT
GTACGGAGCA AACGACGGCC GGCGAAAAGC ACGGCCGCAA AGGGAGGGCG ACGATGA
|
|---|
| Protein sequence | MRRFSRSLPM ALLRGREAVM RHFRPLLRAH GLSEQQWRIL RALTEVEAIE VTELADRAFL
LGPSLSRMLR DLEARKWIAR KPAKDDQRRS RVSITPKGLK LIETVAPFSE QIYADIARHF
GDAKLAALQD MLGALEADLT RMPVRHAADA VDSGPDFRST VRSKRRPAKS TAAKGGRR
|
|---|
| |