| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1695 |
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| Symbol | |
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| ID | 3908682 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 1930094 |
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| End bp | 1932355 |
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| Gene Length | 2262 bp |
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| Protein Length | 753 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637883589 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_485314 |
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| Protein GI | 86748818 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.560166 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.428473 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAGCT ATCTCGAAAC CCAGCTCGAT TTCATCTATT TCTTCTACGG TCTGGCATTC
ATCCTGCTGG GCGCGATGAG TTTCGTCATC GCCCGGGTGC GGCCCAATCT TCGCGACGCC
CGCCTGATCG GTCTGTTTGG TTGCTCGCAC GGAGTGACCG AATGGATGGA CATGACCACG
CTGATCTTCG GGGATTCGAA CGAGTTCGCG ATCTTCCGTT CAGCGATGAT GACTCTGTCT
TTCATTCCGC TCGCCGAATT CGCGCGCAGG GGCGCGGTGA AACTCGGCGT CTGGATGCCT
GGGGCCTGGA TCTATCTGCC CGTCCTGGGG GTGCTCGGAG TCGTCGGCCA TGTCGACGGA
CTCGACGCCG CCAGGGCTCT GGCGCGCTAC GCTCTGTGTG CGCCGGGCGC GCTCGGCACG
GGTCTCGTGA TGCTGGCGCG GCGGCACAAA GTGCGCGAGG CGGGCTGGTC GATTGCGGTT
GGGCTCGCAA TTGCGTTCTC GCTGTATGGT TTGGCTGCCG GCGTCGTCGT CGAGCCCGCC
CCGTTCTGGC CGGCCACGAT CGTCAACCAG GCGTGGTTCG TGGGAGCGAC AGGCGTCCCG
ATCCAACTCG TCCGCGGTCT GATAGCTCTG GTGCTGGCGG CTCTGATCTG GGGGGCCTGG
GGTCGGCGGT TGATCCATGC CTTCGATTGC CCGCGCTACA CCGCCTATCT GCAGCGACAG
TTCTACAGCG TCCTCGCCGC GATGGCCGCG ATCCTGATCT TCGGCTGGGT CTTGACGAAT
ATCCTCGGCG GCATTTTTCG CACCGAAGTC GAGCGGGAGG CGGCGAGCAC TGCCAGCTTG
CTCGTCAACA GCATTGCCGA CGCGGTCGGT ACGGCCGACG CAGTGGTCAG GGTGCTGGCC
GCCTCGCCCG TGATCGCGCC ACTGTTGGTG AGCCCGGAGC GAGCCAACCG CGACCTCGCC
CGCGCCGTCA TCGATCTCCA TGTCGAGACC GCCGGTGCGT CACGTGGTTT CATCCTCGAT
CGCAATGGCC ACATCGTCGA GACCACCGAC CGGCACGATT TCGACGTGCT GGGTGCTGCC
TCCCACAAGA CCACGGTCTG GTTCCAAAGC TCGATCGGCG GTCGGACGGG GCGCAATCTC
CAGATCGATC CGTTCAGCGG CAGGCAATCC TATGTGAGCA GTCTTCCGCT TCACGACCCG
GCCGGATCAA TCATCGGCGT AGTCGCACTC GAGGTCTTGC TCGAGAAGCT GGATGCCAGG
CTGCGCGGTT TCGAGCAGGC GTTCTTTCTG CTCGATGCGC GTGACGTCGT GGTCCTGACC
AGTCGTCCCG CCCAGCTTTC GCGTACTCTG TGGCCTCGGC CTGACATGGT GCCGGCGGCG
CCGGAGCAGC CGTCTTCGAC ACCTCACTCC GAACCGCTCC GTCATGCCGT CACCGGCGGC
GAATGGACCC GCTTCGGCGG CCGCCGCTCT TATGTTCTGC GCAGCGTCGT GGAGGGAACG
CCGTGGTCGG TGGTGCTGAC ACTGCCGGTC GCCGGGATCA CGGCCAGCCG CCTGCTCGGG
ATCATCATCA CATTGCAACT GGCCCTCACG GCGTTGTTCT ATTTCTTCGG CCGTGAGCGC
GGCGTGCGCG ACCGCGTGCA GCAATTGCTT CGGTCCGAGT TGCAGGAACG CGCTGCGGCG
TTAGCGCGTC AGGCGACCAC GGATCCGCTG ACCGGCCTCC ACAACCGGCT CCGATTCAAC
GAAGGTCTGG CTCAGGAACT GGCACGCGTG CGCCGCACCG GCCAGCCGCT TTCGCTGGTC
ATGTTCGATG TGGATCACTT CAAGGAGGTC AATGATCGCT ACGGTCATCC GACCGGAGAT
CAGGTGCTGA TCCGGCTATC CCAGACGGCG GCCGCCCAGC TGCGCCAGAC CGACCTGTTG
GCCCGCTGGG GCGGCGAGGA ATTCGCGATC CTGCTGGTCG ACGCCGACCT CCACGCGGCC
GTCGAAGTCG CAGAAAACCT GCGGCGGCTG GTCGCCCGAA CCCCGTTCGA TCAGATCGGC
TCCGTCACGG CGAGTTTCGG CGTCGCCGAA TGCCGCCCGG ATGAGTCCGC CGATAGTCTG
CTGGAACGTG CCGACGCCGC GCTGTACCGC GCCAAATCCA ACGGCCGCAA TCGGGTGGAA
ATCGATGCGC CGGTCATCGA GGAGACTGTC GCGCTTTCAC CAGCGGAGTC GGGCGACGAG
CCACAGCAAC GCTCCGACCA TAAAAAGCCG ACGCGCGCAT GA
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| Protein sequence | MASYLETQLD FIYFFYGLAF ILLGAMSFVI ARVRPNLRDA RLIGLFGCSH GVTEWMDMTT
LIFGDSNEFA IFRSAMMTLS FIPLAEFARR GAVKLGVWMP GAWIYLPVLG VLGVVGHVDG
LDAARALARY ALCAPGALGT GLVMLARRHK VREAGWSIAV GLAIAFSLYG LAAGVVVEPA
PFWPATIVNQ AWFVGATGVP IQLVRGLIAL VLAALIWGAW GRRLIHAFDC PRYTAYLQRQ
FYSVLAAMAA ILIFGWVLTN ILGGIFRTEV EREAASTASL LVNSIADAVG TADAVVRVLA
ASPVIAPLLV SPERANRDLA RAVIDLHVET AGASRGFILD RNGHIVETTD RHDFDVLGAA
SHKTTVWFQS SIGGRTGRNL QIDPFSGRQS YVSSLPLHDP AGSIIGVVAL EVLLEKLDAR
LRGFEQAFFL LDARDVVVLT SRPAQLSRTL WPRPDMVPAA PEQPSSTPHS EPLRHAVTGG
EWTRFGGRRS YVLRSVVEGT PWSVVLTLPV AGITASRLLG IIITLQLALT ALFYFFGRER
GVRDRVQQLL RSELQERAAA LARQATTDPL TGLHNRLRFN EGLAQELARV RRTGQPLSLV
MFDVDHFKEV NDRYGHPTGD QVLIRLSQTA AAQLRQTDLL ARWGGEEFAI LLVDADLHAA
VEVAENLRRL VARTPFDQIG SVTASFGVAE CRPDESADSL LERADAALYR AKSNGRNRVE
IDAPVIEETV ALSPAESGDE PQQRSDHKKP TRA
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