Gene RPB_1678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1678 
Symbol 
ID3908665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1909886 
End bp1910377 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content70% 
IMG OID637883572 
ProductCinA-like 
Protein accessionYP_485297 
Protein GI86748801 
COG category[R] General function prediction only 
COG ID[COG1546] Uncharacterized protein (competence- and mitomycin-induced) 
TIGRFAM ID[TIGR00199] competence/damage-inducible protein CinA C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCAGG ATCTCGTTCC CCTCGCCGAG AAGGTCGCGC TGCGACTGAT CGCGCAGAAG 
CAGACCATCG CGGTGGCGGA ATCGTCGACC GGCGGGCTGA TCGCCGCGGC GCTGCTCGCA
GTGCCGGGGG CGTCGGCCTA TTTCCTCGGC TCCGCGGTGG TCTATACCCG CGAGGCCCGG
CGCATCCTGA TGGACATTCC CGATCCGCAG ATGAAGGGGC TGCGCTCGTC GTCGGAGCCC
TATGCTGAGC TGCTGGCGCG GCAGATGCGC GCGCGCCTGT CCTCCGACTG GGCGCTGTCG
GAGACCGGCG CGGCCGGCCC CGGCGGCAAC CGCTACGGCG ACGCCGCCGG CCACACCTGC
ATCGCGGTCG CAGGCCCCAC GCAGGCGGTG ATGACGCTGG AGACGGCGAG CAGCAACCGG
CTCGACAACA TGCACGTGTT CGCAAACACC GCGCTGACGT TCCTGCTGCA CACGATGGCG
CAGCGGGATT GA
 
Protein sequence
MMQDLVPLAE KVALRLIAQK QTIAVAESST GGLIAAALLA VPGASAYFLG SAVVYTREAR 
RILMDIPDPQ MKGLRSSSEP YAELLARQMR ARLSSDWALS ETGAAGPGGN RYGDAAGHTC
IAVAGPTQAV MTLETASSNR LDNMHVFANT ALTFLLHTMA QRD