| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1671 |
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| Symbol | |
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| ID | 3908658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 1902793 |
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| End bp | 1903989 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637883565 |
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| Product | amidohydrolase |
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| Protein accession | YP_485290 |
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| Protein GI | 86748794 |
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| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.446042 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCACG ACGCCGCCGC GCCCACGGGA CCGACCAAGC TCGTCATTCG CAACATCGGC
CTCTTGATCA GCGGTGACCT CGACAAGCCG ATCCTCGATG CCGACACCAT CGTTGCGGAG
AACGGCAAGA TCTCCGCGAT CGGTCGGCTG AAGGACGTCG ACACCGAAGG CGCGACCACC
ACCGTCGATG CGGGTGGCGC TGCGGTCACC CCGGGCCTGA TCGACAGCCA CGTCCATCCG
GTGGCGGGCG ACTGGACGCC GCGGCAGAGC CAACTCAACT GGATCGACTC CTCGCTGCAC
GGCGGCGTCA CCACCATGAT CTCGGCCGGC GAGGTGCACT ATCCCGGCCG GCCGCGCGAC
GTCATCGGCA TCAAGGCGCT GGCGATCACC GCGCAGCGCA GCTTCTCCGC CTTCCGCGCC
AGCGGCGTGA AGGTCCATGC CGGCGCTCCG GTGATCGAGC ACGAGATGGA AGAGAACGAC
TTCAAGGAAC TCGCCGCGGC CGGCGTCAAG CTGCTCGGCG AGATTGGGCT CGGCGGCGTC
AAGGACGGAC CGACCGCGAA GAAGATGGTG GCGTGGGCGC GCAAATACGG CATCCAGTCC
ACCATCCACA CCGGCGGCCC GTCCATCGCG GGCTCCGGGC TGATCGACAA GGACGTGGTG
CTGGAAGCCG GCACCGACGT GATCGGCCAC ATCAACGGCG GCCACACCGC GCTGCCCGAC
GGGCAGATCC GCTGCATCTG CGAGGGCTGC AAGGCCGGGC TCGAGCTGGT CCATAACGGC
AACGAGCGCT CGGCGCTGTA CACGCTGCGG ATCGCGCGCG AGATGGGCGA TCTCCATCGC
GTCATTCTCG GCACCGACGG CCCGGCCGGC TCCGGTGTCC AGCCGCTCGG CATCCTGCGG
ATGATTTCGC TGTTGTCGTC GCTCGGCGAT CTTCCCGCCG AACAGGCGTT CTGCCTCGCC
ACCGGCAACA CCGCGCGGAT GCGCGATCTC GACTGCGGCC TGATCGAGGT CGGCCGCGTC
GCCGATTTCG TGATCATGGA CGCGGCCCAG CACTCGGCCA GTTCGTCGCT GCTGGAAAGC
GTCCGCCTCG GCGATCTGCC GGGCATCGGC ATGACCATCA TCGACGGCAT CGTGCGCAGC
GAACGCTCCC GCAACACCCC GCCGGCGACG CGACTGCCGA GCATCGTCAA GGCCTGA
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| Protein sequence | MAHDAAAPTG PTKLVIRNIG LLISGDLDKP ILDADTIVAE NGKISAIGRL KDVDTEGATT
TVDAGGAAVT PGLIDSHVHP VAGDWTPRQS QLNWIDSSLH GGVTTMISAG EVHYPGRPRD
VIGIKALAIT AQRSFSAFRA SGVKVHAGAP VIEHEMEEND FKELAAAGVK LLGEIGLGGV
KDGPTAKKMV AWARKYGIQS TIHTGGPSIA GSGLIDKDVV LEAGTDVIGH INGGHTALPD
GQIRCICEGC KAGLELVHNG NERSALYTLR IAREMGDLHR VILGTDGPAG SGVQPLGILR
MISLLSSLGD LPAEQAFCLA TGNTARMRDL DCGLIEVGRV ADFVIMDAAQ HSASSSLLES
VRLGDLPGIG MTIIDGIVRS ERSRNTPPAT RLPSIVKA
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