| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1649 |
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| Symbol | |
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| ID | 3909926 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 1878552 |
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| End bp | 1879391 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637883543 |
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| Product | binding-protein dependent transport system inner membrane protein |
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| Protein accession | YP_485268 |
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| Protein GI | 86748772 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.857985 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACAAT TCTGGCGATT GCTGGTACGC AACCCCGGCG GGCTGATCGG GCTGATCATC
CTGCTGGTCG TGATCACGGT CGCCGTGATC GGCCCGCTGC TGTTCCCGAC CTCGCCCTGG
CGCATGGTGC AGCGGCCGTT TCTGCCGCCC TTCACGATGG CCGGCCTGCC GCTGGGGACC
GACGCGCTCG GTCGCGACGT GATGGCCGGG ATCATCTACG GCACCCGCGT GTCGCTGCTG
GTCGGACTCG TCTCCACGCT GGTGGCGCTT GCGGTCGGCA TTCCGGTCGG CGCAATGGCC
GGGTATTTCG GCGGCCGTAT CGGCGATGCC CTGATGCGCT TCACCGAATT CTTCCAGACC
GTTCCGAGCT TCGCGCTTGC GATCGTGCTG GTGGCCGTGC TGCAGCCCTC GATCGTGTCG
ATCATCATCG CGATCGCGAT CGTCAGTTGG CCGCCGGTGG CGCGGTTGGT GCGCGGCGAG
GTGCTGTCGC TGCGGACCCG TGAATACGTT CAGGCAGCGG TCGTGACCGG GCAGACCAAC
AGCTGGATCA TCTGGCGCGA GATTCTCCCC AACGCGCTGT CCCCGGTCAT CGTGCTGGCG
TCGCTGATGG TCGCGACCGC CATCCTGCTC GAATCGTCAT TGTCGTTTCT CGGCCTCGGC
GATCCCAACC TGATGTCGTG GGGCTACATG GTCGGCGCCG GCCGCACCGT GATCCGTCAG
GCCTGGTGGA TCACGGTGTT TCCGGGCATC GCCATTCTGG TCTCGGTGCT GGCGCTGAAC
CTGATCGGCG AAGGTCTCAA CGATGCGCTC AATCCGCGCC TCAGCAAGGA TGGACGCTGA
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| Protein sequence | MKQFWRLLVR NPGGLIGLII LLVVITVAVI GPLLFPTSPW RMVQRPFLPP FTMAGLPLGT
DALGRDVMAG IIYGTRVSLL VGLVSTLVAL AVGIPVGAMA GYFGGRIGDA LMRFTEFFQT
VPSFALAIVL VAVLQPSIVS IIIAIAIVSW PPVARLVRGE VLSLRTREYV QAAVVTGQTN
SWIIWREILP NALSPVIVLA SLMVATAILL ESSLSFLGLG DPNLMSWGYM VGAGRTVIRQ
AWWITVFPGI AILVSVLALN LIGEGLNDAL NPRLSKDGR
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