| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1586 |
|---|
| Symbol | |
|---|
| ID | 3910057 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 1786378 |
|---|
| End bp | 1787520 |
|---|
| Gene Length | 1143 bp |
|---|
| Protein Length | 380 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637883482 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_485207 |
|---|
| Protein GI | 86748711 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5397] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.989603 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGCAT CCGCCGCGCT CGATATCTCA TACCAGACCC TCTACTCTGA ACTCGTCCAG
CGCTGCATGG ACGGTAGCTT CACGTCCGAG TTTTCTGCCC ACGGACGCTT CGTCGCCGTC
GAGGTAAAGA ACAGGAAATA CTGGTATTTT GACACCCCGA ATCCTGAATC TGGCGCACAG
AAACGGCGAT ACATCGGTCC CGTCGACGAT CCGGACATCA CTAAACGCGT CGAAGCGTTC
AAGGATCTCA AGGCGGACCT GAAGGGGCGC CGGCGTCTGG TCGCCACGCT GACGCGCGAA
GCCTATTTGC CCCGGCCGCT GATGACGAGC GGCCAGGTGG TCGAGGCATT GGCGAAGGCC
GGCTTCTTCC GTCTCCGCGG GGTCTTGATA GGGACCGTTG CGTACCAATG CTATTCCGGC
GTGCTCGGCC GCCGCCTCAA CGCTACCGCG ATGCAGACGG GCGACGCCGA TTTCGCGCAG
TTTCACGAGA TCTCGGTGGC GGTCGGCGAC AGCCTTCCGC CGATCCTGGA CGTTCTTCGC
AGCGTCGACG ACACCTTCCG CGAAATCCCC AGCCAGATGG ATGGGCGCGT CTCCACGCAG
TTCGTCTCGC GCAACAACTT CAAGGTCGAA TTTCTGACGC CGAACCGCGG TCCGGACGAT
TTCGCAGGCA AGCCGGTCCG AATGCCGGCA TTGGGGGGCG TCGCAGCGTC ACCGCTGCGC
TTTCTCGACT TCCTGATCCG TCATCCGGTT CGGGCCGTGC TGCTGCACGG AGCTGGCGTG
CCGGTTCTCG TTCCGTCCCC CGAACGCTAT GCCGTGCACA AGCTTATCGT CGGATCCTGC
CGAAGGGAGG ATCCGGACAC CGCGAGCAAG GCGGCCAAGG ATCGCCTGCA GGCCAAATCC
ATCATGGAGG CGATGATCGC CAACCGGCAG CAAGACGATC TGGCCGCCGC CTATATGGAG
GCCTGGGACC GCGGTGATCA TTGGGTCGCC GCGATCCGCA CCAGTCTGGC GACCTACGAC
GATCAGTTCC GCAGTTTGCT CGCCGAGGAA ATCGGCAAGG GAATCAAGAA CAACGACGCC
GAGCCAAGCG ACTACGGCCT GGGCGGCGAA CCGAAGGAAG CGATCTCGCC GGGGCCGAGA
TAG
|
|---|
| Protein sequence | MAASAALDIS YQTLYSELVQ RCMDGSFTSE FSAHGRFVAV EVKNRKYWYF DTPNPESGAQ
KRRYIGPVDD PDITKRVEAF KDLKADLKGR RRLVATLTRE AYLPRPLMTS GQVVEALAKA
GFFRLRGVLI GTVAYQCYSG VLGRRLNATA MQTGDADFAQ FHEISVAVGD SLPPILDVLR
SVDDTFREIP SQMDGRVSTQ FVSRNNFKVE FLTPNRGPDD FAGKPVRMPA LGGVAASPLR
FLDFLIRHPV RAVLLHGAGV PVLVPSPERY AVHKLIVGSC RREDPDTASK AAKDRLQAKS
IMEAMIANRQ QDDLAAAYME AWDRGDHWVA AIRTSLATYD DQFRSLLAEE IGKGIKNNDA
EPSDYGLGGE PKEAISPGPR
|
|---|
| |