| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1552 |
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| Symbol | |
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| ID | 3908751 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 1749350 |
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| End bp | 1750324 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637883448 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_485173 |
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| Protein GI | 86748677 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1089] GDP-D-mannose dehydratase |
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| TIGRFAM ID | [TIGR01472] GDP-mannose 4,6-dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.717639 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAAGA CCGCACTGAT ATTCGGGATC TCCGGACAGG ATGGCGCCCT GCTTGCGCTG
CATCTGCTGG AGCGCGGATA CGAGGTCCAT GGCACGTCGC GTGACAAGGA ATTGTCGAGC
TTCGCGAACC TCAGGCGTGT CGGAATTCAG GATCGGGTTC GGCTGTATTC CGCCAGCCTC
ACGGACTTCC GCAGCGTGCT GCAGGTCGTC GCCGACGCCG CCCCCAGCGA GATCTACAAC
CTGGCGGGGC AATCGTCGGT CAGCCTGTCG TTCGAACAGC CGGTCGAAAC CCTGGATTCC
ACGATCTTCG GGCCCCTCAA CATTCTCGAA TCGATCCGGC TTCTGAAGCT CGATGCGCGG
CTCTACAACG CCTGCTCGAG TGAGTGTTTC GGCAATACCG AGCTGGCGGC GACCGAACAG
ACCCCGTTCA ATCCGCGAAG TCCCTACGGC GTCGGCAAGG CGGCCGCATT CTGGACCGTC
GCCAATTATC GCGATGCTTA CGGCTTGTTC GCCTGCTCCG GCATCCTGTT CAATCACGAC
TCGCCGTTGC GTCCCCGTCG GTTCGTCACG CGCAAGATCG TCGCCGGCGC GGCCGATATC
GCCGAGAAGA AATCCGACCG TCTGATGCTC GGCAGCCTGC ATGTCGCGCG CGACTTCGGC
TGGGCGCCGG AATACGTCGA AGCAATGGCG ATGATGCTGG GCGCGGACAG CCCCGGAGAC
TACGTCATCG CAACGGGACA AACGCACTCG CTCGAGAGCT TTGTCGACAA GGCGTTTGCA
TTTTTCGGTC TGGATTGGCG CCGCCATGTC GAGATCGACG ATCGCCTGAT GCGTCCGACG
GAAATCGTGA CCAGCGCGGG AAACCCCGAG AAGGCCAAGC GGGTGCTGGG CTGGGAAGCA
ACCGTGACCA TGGAAGAGGT GGTGCGTAGA CTTTCGGAAG CCGAGTTGAG TCTACGGCAC
GACGCTTCCG CCTGA
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| Protein sequence | MAKTALIFGI SGQDGALLAL HLLERGYEVH GTSRDKELSS FANLRRVGIQ DRVRLYSASL
TDFRSVLQVV ADAAPSEIYN LAGQSSVSLS FEQPVETLDS TIFGPLNILE SIRLLKLDAR
LYNACSSECF GNTELAATEQ TPFNPRSPYG VGKAAAFWTV ANYRDAYGLF ACSGILFNHD
SPLRPRRFVT RKIVAGAADI AEKKSDRLML GSLHVARDFG WAPEYVEAMA MMLGADSPGD
YVIATGQTHS LESFVDKAFA FFGLDWRRHV EIDDRLMRPT EIVTSAGNPE KAKRVLGWEA
TVTMEEVVRR LSEAELSLRH DASA
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