| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1498 |
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| Symbol | |
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| ID | 3908811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 1692491 |
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| End bp | 1693417 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637883393 |
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| Product | binding-protein dependent transport system inner membrane protein |
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| Protein accession | YP_485119 |
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| Protein GI | 86748623 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.241637 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.263961 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGACGGC TGGCGTCCAC CATCCCCGTG GTGGTTGTCG TTGCCGCTCT CATCTTCTTT
GTTCTGCGGC TCGCCCCCGG CGATCCGGCT TTGGCCATCG CCGGGGACGG CGCGACGCCG
GCACAACTGG AAGCCCTTCG GGCCCAGCTC GGCCTCGACA AGAGCATTTT GCAGCAATTC
CTCATCTGGG GGGAATCGCT GCTCCGATTG GATCTCGGCC AGTCCCTCTA CTACCACATC
CCCGTCACCA CGCTCATCGG CCAGCGCCTG CCTCCGACGG CAAGCCTGGC GATCCTGACC
ATGCTCATCT CGGTCCCGAT CGCCGTCTAT CTCGGCGCAC TGGCGGCGTC CCGGCAAGGA
AGCTCGATCG ATCGCATGGT GAATGCGAGC GCCGTCATCG CATTCTCCAT ACCCGTCTTC
GTGCTGGGTT ACGTCCTGAT CTGGCTGTTT GCGCTGAAAA TGGGTCTGCT TCCGGTGCAG
GGCACCGGCC CTGCGGACGC CGGACTGTTG ACGAAACTCA AATACTTCAT CCTTCCGGCC
GTCGGACTGG CGTTCGGCCA GATCGCGCTG CTGACACGCG TAACGCGCGC CTCGGTCATC
GACGTCCTGC ACGAGGATTT CATCAAGACC GCCTACGCGA AGGGCGCCTC CGCAAAGCGG
GTTCTGTGGC GCCACGCCGT TCGCAACGCC GCGGTCCCCA TCGTCACCAT CATCGGGCTG
TCCTTCGCGG TGCTGATCGG CGGCGTGGTC GTCTCCGAGA CCGTTTACGC CATTCCCGGG
CTCGGCAAAC TGACCGTCGA CTCGGTGCTG GCGCGGGACT TCCCGGTGGT CCAGGGCCTC
GTGATCTTTT TCTCGTTCAC CTATGTCGGC ATCAACCTGC TGGTCGACGT CCTCTACGTC
GCGCTCGACC CGCGCATTCG ATATTGA
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| Protein sequence | MRRLASTIPV VVVVAALIFF VLRLAPGDPA LAIAGDGATP AQLEALRAQL GLDKSILQQF
LIWGESLLRL DLGQSLYYHI PVTTLIGQRL PPTASLAILT MLISVPIAVY LGALAASRQG
SSIDRMVNAS AVIAFSIPVF VLGYVLIWLF ALKMGLLPVQ GTGPADAGLL TKLKYFILPA
VGLAFGQIAL LTRVTRASVI DVLHEDFIKT AYAKGASAKR VLWRHAVRNA AVPIVTIIGL
SFAVLIGGVV VSETVYAIPG LGKLTVDSVL ARDFPVVQGL VIFFSFTYVG INLLVDVLYV
ALDPRIRY
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