| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1489 |
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| Symbol | |
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| ID | 3908802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 1678627 |
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| End bp | 1679925 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637883384 |
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| Product | peptidase M20 |
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| Protein accession | YP_485110 |
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| Protein GI | 86748614 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0188879 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.859959 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATGA TACTGCCTGC TGTCACCGCC GACATCGAAG CCGATGTGCT GTCGCGGATC
ACCGAGGAAC GCTGGCTGAC GCTGGCCAGT GAACTGATCA CCACCGGCCA GCCGCGCGCC
ACCAACCCAC TCGATCCCGA TTTGCCGGCC GCCGAGGAGG AAGCGATCGC GATGCTGATC
GCCGGCAAGC TCGAAGCGCT CGGCATGGCG GTGACCAAGC ATGCGGCGCA GCCGCACCGA
CCGAACATTC TGGGCGTGCT GCCAGGCCGC AAGGATGCGC CGTCGCTGAT CCTCAACGAT
CACCTCGACA CCTATCCGGC GGTGGAGCCG GAGAAGTGGC ACATGACCGG CTTCGATCCG
TTCAAGCCGA CCCGGCATGG CGACCTGCTC TATGCCCGCG GCACCTCCGA CACCCGCGGC
AACCTCGCCG CCTCACTGCT CGCCGTCCAG GCGCTGATCG AGGCCGGCGT CCGCTTCGAT
GGCACGCTGA TGTGCTGCTA CACGGTCGAC GAGGAGCGCA ACGGCACGGA GGGCTCGATC
TATATGCTGC AGCAGGTCGG CCTCACCGCC GACTATTCGA TCACCGCGGA GCCGACCGCC
TGGGGCGATG TCTCCGGCGA CTGGGGCATG AACCTGTCCG TCGCAAATTC GGGTCACTGC
CTGATCGAAA TCGTCGTTCA GGGCATCAAG TCGCATATCT GGCGGCCCGA CATCAGCGTC
AACGCCATCA TGGCGGCCGG CAAATTGCTG CCGCAACTGC AGGCGATGGC GTTCACGCAT
GTGCCGGCGG CGTTCATGGG CCACACCCCG CCGTGCTGTT CGGTGGTGCG AATCCGCGGC
GGGCTGCCCG GCGAGATGCA GTTTTCGCCG GACGCCTGCA CCATCACGGT GGCGGCGGTC
GGGCTGGTAC CGGGCATGAC GCTGGACAGT GTGATCGCCG ACATCGAGCA GACCATTCGC
CAGACCTTTG CCTCGGTGAA CGACGTCACC GCAACCGTCC GGCAGGTGCC GGGCTCGCTG
TTCGTCAACG GCACCGAGCC GGTGCCGGTC GATCAGGAGC CCTGCGTGTC GCTGCGCGCG
GTGTATCGCG AGTTGATGGG CGCCGAGCCC GGCGTCAACC GCAAGAACGC CTTCAACGAC
ACCATCCGGT TTCGCGAGGC CGGCATCAAT GCGGTGACCT TCGGCCCGGG CGAGGACGGC
TGGGCCGTCG ACAACGAAAA CATCTCGATC ACCAAGGCGG TGATGGCGAC GCGGATCTAC
GCGCTCTCCA TCATGCGGAT CCTGGGAGTG CGTGCATGA
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| Protein sequence | MNMILPAVTA DIEADVLSRI TEERWLTLAS ELITTGQPRA TNPLDPDLPA AEEEAIAMLI
AGKLEALGMA VTKHAAQPHR PNILGVLPGR KDAPSLILND HLDTYPAVEP EKWHMTGFDP
FKPTRHGDLL YARGTSDTRG NLAASLLAVQ ALIEAGVRFD GTLMCCYTVD EERNGTEGSI
YMLQQVGLTA DYSITAEPTA WGDVSGDWGM NLSVANSGHC LIEIVVQGIK SHIWRPDISV
NAIMAAGKLL PQLQAMAFTH VPAAFMGHTP PCCSVVRIRG GLPGEMQFSP DACTITVAAV
GLVPGMTLDS VIADIEQTIR QTFASVNDVT ATVRQVPGSL FVNGTEPVPV DQEPCVSLRA
VYRELMGAEP GVNRKNAFND TIRFREAGIN AVTFGPGEDG WAVDNENISI TKAVMATRIY
ALSIMRILGV RA
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