Gene RPB_1479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1479 
Symbol 
ID3908792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1668930 
End bp1669163 
Gene Length234 bp 
Protein Length77 aa 
Translation table11 
GC content61% 
IMG OID637883374 
Product4Fe-4S ferredoxin, iron-sulfur binding 
Protein accessionYP_485100 
Protein GI86748604 
COG category[R] General function prediction only 
COG ID[COG1245] Predicted ATPase, RNase L inhibitor (RLI) homolog 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCTCG CCAGTTACGA AACCTCGGTT CCCGTCGTGG TCGACGAAGC CAAATGCATC 
GCCGACAAGG GCTGCACCGT CTGCGTCGAC GTCTGCCCGC TCGATGTGCT GCGGATCAGC
GATCTCACCG GCAAGGCCTT CATGGCCTAT GACGAATGCT GGTACTGCAT GCCGTGCGAA
GCCGATTGCC CGACCGATGC CGTGAAGGTC AACATCCCCT ATCTGCTGAG GTGA
 
Protein sequence
MPLASYETSV PVVVDEAKCI ADKGCTVCVD VCPLDVLRIS DLTGKAFMAY DECWYCMPCE 
ADCPTDAVKV NIPYLLR