Gene RPB_1476 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1476 
Symbol 
ID3908789 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1665739 
End bp1666059 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content68% 
IMG OID637883371 
Producthypothetical protein 
Protein accessionYP_485097 
Protein GI86748601 
COG category[S] Function unknown 
COG ID[COG3536] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.763244 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGTTG CCCCGTCCAA ACTCGCTCGG ATCGACGTCG CACCCGCGCG GATCGGCGTC 
AGCGCCGATC TCGACGCGCT CGAACTCGTT CTCGATCATG GCGAACAGCT TCGGCTGCCG
GCCGGAGCGT TGCGAGCGGC CTGCCGGTGC GCGTTCTGCG TCCGCGCGCG GATCGACGGC
GTGTTCCCGG AACGCTTCGA CGGCCTGGCG ATCACCGGCG TTGCCCCGAT CGGCGGCTAT
GCCGTCAACC TCGCCTTCTC CGACGGCCAC AATCGCGGCA TCTACCCCTG GAGCCTGCTC
CGAGCTCTGG GCGACGAATA G
 
Protein sequence
MSVAPSKLAR IDVAPARIGV SADLDALELV LDHGEQLRLP AGALRAACRC AFCVRARIDG 
VFPERFDGLA ITGVAPIGGY AVNLAFSDGH NRGIYPWSLL RALGDE