| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1456 |
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| Symbol | |
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| ID | 3908406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 1644717 |
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| End bp | 1645532 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637883350 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_485077 |
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| Protein GI | 86748581 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.977673 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGCGC GCGCCGCCCG CCTGTCCCGC TTCAACCTCG TGTCGCTGAC GCTGGGACTT
GCGTTCCTGT ATCTGCCGAT CGTCATCATG GTGATCTACT CGTTCAACGA TTCGCGCCTG
GTCACGGTGT GGGGCGGCTG GTCGCTGCGC TGGTATCGCG AATTGTTGCA GGACGAGGCG
ATGCTGGCGG CGGCGTGGAT GAGCCTGAAG GTGGCGCTGG CGTCGGCGAC CGCGGCGGCG
GTGTTCGGCA CGCTGGCGGC GGTGGCGCTG TCGCGCGCCG GGCACTTTCG CGGCTGGACG
TTGTTCTCCG GGATGCTGTA TGCGCCGCTG GTGATGCCGG AAGTGATCAC CGGCCTGTCG
CTGCTGCTGC TGTTCGTGGC GCTGAATGCC GAGCGCGGCT TCTGGACGGT AACGATCGCG
CATACCACGC TGACGATGTG CTTCGTCGCG GTGGTGGTGC AGTCGCGCCT GCACGCGCTC
GACCGCAGCG TCGAGGAGGC GGCGATGGAT CTCGGCTGCG GCCCGGTCGA GGCGTTCTTG
CAGGCCACGG TGCCGCTGAT CTGGCCGGCG ATCGCGGCCG GCTGGATGCT GGCCTTCGCG
CTGTCGCTCG ACGATCTGGT GATCGCCAGC TTCACCACCG GCCCGGGCTC GGCGACGTTG
CCGATCCGGA TCTATTCGGA GATCAGGCTC GGCGTGAAGC CGCAGATCAA CGCGGTCTGC
ACCCTGATCA TCGCGGTCGT CGCGCTGGCG ATCGTGCTCG CCTCGCTGGC GTCGAAACTG
TCGCGCGCCA AGGCCGACAG CGCCGCGCCG ATGTGA
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| Protein sequence | MAARAARLSR FNLVSLTLGL AFLYLPIVIM VIYSFNDSRL VTVWGGWSLR WYRELLQDEA
MLAAAWMSLK VALASATAAA VFGTLAAVAL SRAGHFRGWT LFSGMLYAPL VMPEVITGLS
LLLLFVALNA ERGFWTVTIA HTTLTMCFVA VVVQSRLHAL DRSVEEAAMD LGCGPVEAFL
QATVPLIWPA IAAGWMLAFA LSLDDLVIAS FTTGPGSATL PIRIYSEIRL GVKPQINAVC
TLIIAVVALA IVLASLASKL SRAKADSAAP M
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