Gene RPB_1442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1442 
Symbol 
ID3908392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1630289 
End bp1631236 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content71% 
IMG OID637883336 
ProductABC transporter related 
Protein accessionYP_485063 
Protein GI86748567 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1118] ABC-type sulfate/molybdate transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGAATG ACGTGACGAA GGCACACGGC GGTACGCTGC GGGTGGCTGT CCGGATGCGG 
CTCGACGGGC CGGCCGGGCC GTTCGATCTC GACGTCGACC TGTCGATCGC GGCCGGATCG
CTGGTCGCGA TCGTCGGCCC GTCAGGCGCC GGCAAGACCA CGCTGCTGCG CGTCGTCGCC
GGGCTGGCAC GCCCGCAGCA TGCCCAAATC CATCTCGGAT CGACGCCATG GTGTGACACC
GAATCGCGCG TCGAACTACC GACCCGACGC CGCTCGATCG GCTTCGTGTT TCAGGACTTC
GCCCTCTTTC CCAACATGAC CGTGCGCGGC AATGTCGACT ACGCGCTCGG CGCGCGGGGC
GGCGCAGGCG ACGCCGATCG GCTGCTCGAT CTGGTCGGCC TATCCGGCCT TGCCGGGATG
CCCCCCACCC GGCTGTCCGG CGGCCAGAAG CAGCGACTGG CGCTGATCCG CGCGCTGGCG
CGGCGCCCGG CCGTGCTGAT GCTGGACGAG CCGCTGTCGG CACTCGACCC GGCGATGCGC
CGCAAACTGC AGGACGATCT GCGCGAACTC CACGCCCGGT TCGGCGCGAC GACGCTGCTG
GTCAGCCACG ACGCCGCGGA AATCCTGCGG CTCGCCGATC GGGTGATCCG GCTCGACCAT
GGCAAGGTGG CCTTCGACGG AGCGCCGGCG GCCGCGTTCG GCGCGGCCGA GCCCGAGGAC
GGACTGACGA TGATCGGCGA GTATCTCGGC GGTCGCGATG CGCACGGCAC CTGCATGGTC
CGGATCGACG GACGCGCCAG GCGGCTGCGC TTGAGCGGCG ACGGCGTCAC GTCGCTGCAG
CCGGGCGACA CGGTGATGCT ATACGCCGAT CGGGCGGCGA TACGGCCGGC CGCAATCCGA
TCCGATGGCA CCCCGCCCGA CGCGAAACGG GCCAGCCTCC GCGGCTGA
 
Protein sequence
MRNDVTKAHG GTLRVAVRMR LDGPAGPFDL DVDLSIAAGS LVAIVGPSGA GKTTLLRVVA 
GLARPQHAQI HLGSTPWCDT ESRVELPTRR RSIGFVFQDF ALFPNMTVRG NVDYALGARG
GAGDADRLLD LVGLSGLAGM PPTRLSGGQK QRLALIRALA RRPAVLMLDE PLSALDPAMR
RKLQDDLREL HARFGATTLL VSHDAAEILR LADRVIRLDH GKVAFDGAPA AAFGAAEPED
GLTMIGEYLG GRDAHGTCMV RIDGRARRLR LSGDGVTSLQ PGDTVMLYAD RAAIRPAAIR
SDGTPPDAKR ASLRG