| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1385 |
|---|
| Symbol | |
|---|
| ID | 3908490 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 1576607 |
|---|
| End bp | 1578271 |
|---|
| Gene Length | 1665 bp |
|---|
| Protein Length | 554 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637883279 |
|---|
| Product | signal transduction histidine kinase |
|---|
| Protein accession | YP_485006 |
|---|
| Protein GI | 86748510 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3920] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAGTAGAA GCTTGATTCG CCTAGTCTCC ATCATCGCGC TGATCGCCGT CGTCGGGATG
CTGCTGTCCG GCTTCGCGGC ATATCGGATC TATGAACAGG AATCGGCGGT CGAGCGGATC
GCGCTGGGCC GGGCGATCGA CGTGCATGCC AGCCAGGTTC AGGATCGGCT GACCGAGCGG
GAACTGCTCG GCAGGGTTGC GTCTGGCTTG TTTCGCACGC CTGCGGTGAT CAGGGCGGAC
ATGCTGCAGC CGCTGCGCTC GTCGATTTAC GCCTTCAAGG CCGACTTCCT GCTGGCGAGC
TGGATCGTCA GGCTGAAGCC CGAAGAGTTC GCTGCCGCGC AGGCCGAACT GGCCAAGGCC
GGCTTTTCCG ACACCACAAT CCGCCATTCC GACGGGACCC CGATTGATCC GTCCACGCTT
CGCGATCCGG TCGACGTGGT GATGGACATC GAGCCGCGTA ATGCCGAAAC CGTTGCGCTG
CCGGGGCGAT CGCTCGACGA CCATCCGGTT CTGGGGCGAA TGTTCGCCCG CTCGCTCGAG
TCCGGGAAGC CGGAAGCCTC GGACCCATTG CGTCTGGGCG CCGCCGATGG GCCGATCGGT
GTGGTATTGG CGGCGCCGGT GATGACCGAA GACGCCTCGG CGGCGGTCGG ATTCATCACC
TTTTCCTACG ATCTCTCGGC GCTGATGCTG ACGAACGACG ATATGTCGAT GTTTTCCGTG
GTGCTCGCCG ATCCGCGGAA ACCCGATGTC GAACTGCTTG CCGACGAGCG CGGCCGGGTG
ACTGAACGGC CGGCGCACCC GAACGGCGAG AGGCCGATGA TGGTCCGGAC CATGACCTTC
GGTGATCGCG ACTGGTCGCT GGCCTACTAC GCGCGTGTCA GTCCGTTCGT CCGCGCTCAG
CAGGTCGCGG CAATCGTCGC TGCAATCGGC CTGGCGCTCA CCTTCATCAT CTGCGGCCTG
TTCGGTTACG TCAGCAACAG CAACGTCAGG CTGCGGCGCG AAATCGAGAT GCGGATCGGC
TTCGAGCGAC GCCTGACTGC GGTGATCGAC GAGCTCAACC ACCGGGTCAA GAATATCCTG
GCCGTGATCC AGTCGATCGT GACGCGGACG CTGCGGCACG GTTCGGACGT CGACGTCGCC
CGCGAACTGC TGATCGGGCG CATCCATGCC ATGTCCAACG TCGTCTCGCT GCTGAGCGAG
AGCCAATGGC AGGGCGTGAT GCTGAAGGGG CTTTTCGAAG CGAGGGCAAT CCCGCATGCA
GACCGCATCG CGGTCAACGG CCCGGACATC GCGGTGAGCG CGCGTGCGGC GCAGAGTCTG
TCTCTGCTGT TCTTCGAGCT CGCTTCGCAC TCCGACGAGG GATTGTCGCT GGTCGGCAAG
CACCCGCACA TCGTTGCGAG CTGGGAAGTG AAGGGCGAGG GGGCCGATTC GGTGTTCAGC
TTCCGCTGGG AGGAGTTCAA CACCAGCGAG GCGACGCGGC GTCCCGACAG CGAATTCGGG
GTCATTCTGC TCGATCGCGT CGCTCCGGAA GCACTCGGTG GCACGTCCAA ACGCCATTTC
ACCGACCTCA GCTATGTCTA TGAGCTGACC GCGCCGATGG AAACCGTCGT CGACATCAAC
GAAAGAGACC GCACCGGCCA GATCTCGGCG CCGCTCCGCC GCTAG
|
|---|
| Protein sequence | MSRSLIRLVS IIALIAVVGM LLSGFAAYRI YEQESAVERI ALGRAIDVHA SQVQDRLTER
ELLGRVASGL FRTPAVIRAD MLQPLRSSIY AFKADFLLAS WIVRLKPEEF AAAQAELAKA
GFSDTTIRHS DGTPIDPSTL RDPVDVVMDI EPRNAETVAL PGRSLDDHPV LGRMFARSLE
SGKPEASDPL RLGAADGPIG VVLAAPVMTE DASAAVGFIT FSYDLSALML TNDDMSMFSV
VLADPRKPDV ELLADERGRV TERPAHPNGE RPMMVRTMTF GDRDWSLAYY ARVSPFVRAQ
QVAAIVAAIG LALTFIICGL FGYVSNSNVR LRREIEMRIG FERRLTAVID ELNHRVKNIL
AVIQSIVTRT LRHGSDVDVA RELLIGRIHA MSNVVSLLSE SQWQGVMLKG LFEARAIPHA
DRIAVNGPDI AVSARAAQSL SLLFFELASH SDEGLSLVGK HPHIVASWEV KGEGADSVFS
FRWEEFNTSE ATRRPDSEFG VILLDRVAPE ALGGTSKRHF TDLSYVYELT APMETVVDIN
ERDRTGQISA PLRR
|
|---|
| |