Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_1303 |
Symbol | |
ID | 3908176 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 1485303 |
End bp | 1485932 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637883197 |
Product | hypothetical protein |
Protein accession | YP_484924 |
Protein GI | 86748428 |
COG category | [S] Function unknown |
COG ID | [COG2860] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.306176 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCGAGA CCGTCACCAC GATACTCGAC TGGATCGGCG TCGTCGCGTT CACCGTCTCG GGCGCGTTGG TGGCGTCGCG CAAGCAGATG GACATCGTCG GCTTCGCGCT GCTGGGCACG GCGACCGGCA TCGGCGGCGG CACGCTGCGC GACGTCCTGC TCGGTCTGCC GGTGTTCTGG GTGCACGAGC CGGCCTATCT CGCGACCTGC GTCGCGGTCT CCGCCGTGGT GTTCTTCACC GCGCATATTC CGCATTCCCG CTACAAGGCG CTGTTGTGGC TGGATGCGAT CGGGCTCGCG CTGTTCGCCG TCACCGGCGC GGAGACGGCG GCGCTGGCGG GCGCCAACGG AATCGTGGCC GTCGCCATGG GCGTGGTCAC CGCGACCTTC GGCGGCATCA TCCGCGATCT GCTCGGCGGC GAGATCCCGG TGATCCTGCG GCGCGAGATC TACGTCACGG CGGCGCTGGT CGGCGCGGCG GCCTTCGTTC TCCTGACGAT GGTCGGCGCC CCGCGCGAAA TCAGCACGGG CATCGGCTTT GCGCTCGGCT TGGCCGTGCG CGCCGCAGCG CTGCAGCGCG GCTGGTCGCT GCCGCGCTAC CGGCCGCGAC CGGGGCGCGG AGACAACTGA
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Protein sequence | MFETVTTILD WIGVVAFTVS GALVASRKQM DIVGFALLGT ATGIGGGTLR DVLLGLPVFW VHEPAYLATC VAVSAVVFFT AHIPHSRYKA LLWLDAIGLA LFAVTGAETA ALAGANGIVA VAMGVVTATF GGIIRDLLGG EIPVILRREI YVTAALVGAA AFVLLTMVGA PREISTGIGF ALGLAVRAAA LQRGWSLPRY RPRPGRGDN
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