Gene RPB_1303 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1303 
Symbol 
ID3908176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1485303 
End bp1485932 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content71% 
IMG OID637883197 
Producthypothetical protein 
Protein accessionYP_484924 
Protein GI86748428 
COG category[S] Function unknown 
COG ID[COG2860] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.306176 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGAGA CCGTCACCAC GATACTCGAC TGGATCGGCG TCGTCGCGTT CACCGTCTCG 
GGCGCGTTGG TGGCGTCGCG CAAGCAGATG GACATCGTCG GCTTCGCGCT GCTGGGCACG
GCGACCGGCA TCGGCGGCGG CACGCTGCGC GACGTCCTGC TCGGTCTGCC GGTGTTCTGG
GTGCACGAGC CGGCCTATCT CGCGACCTGC GTCGCGGTCT CCGCCGTGGT GTTCTTCACC
GCGCATATTC CGCATTCCCG CTACAAGGCG CTGTTGTGGC TGGATGCGAT CGGGCTCGCG
CTGTTCGCCG TCACCGGCGC GGAGACGGCG GCGCTGGCGG GCGCCAACGG AATCGTGGCC
GTCGCCATGG GCGTGGTCAC CGCGACCTTC GGCGGCATCA TCCGCGATCT GCTCGGCGGC
GAGATCCCGG TGATCCTGCG GCGCGAGATC TACGTCACGG CGGCGCTGGT CGGCGCGGCG
GCCTTCGTTC TCCTGACGAT GGTCGGCGCC CCGCGCGAAA TCAGCACGGG CATCGGCTTT
GCGCTCGGCT TGGCCGTGCG CGCCGCAGCG CTGCAGCGCG GCTGGTCGCT GCCGCGCTAC
CGGCCGCGAC CGGGGCGCGG AGACAACTGA
 
Protein sequence
MFETVTTILD WIGVVAFTVS GALVASRKQM DIVGFALLGT ATGIGGGTLR DVLLGLPVFW 
VHEPAYLATC VAVSAVVFFT AHIPHSRYKA LLWLDAIGLA LFAVTGAETA ALAGANGIVA
VAMGVVTATF GGIIRDLLGG EIPVILRREI YVTAALVGAA AFVLLTMVGA PREISTGIGF
ALGLAVRAAA LQRGWSLPRY RPRPGRGDN