| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1280 |
|---|
| Symbol | |
|---|
| ID | 3908153 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 1464620 |
|---|
| End bp | 1465456 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637883174 |
|---|
| Product | transglutaminase-like |
|---|
| Protein accession | YP_484901 |
|---|
| Protein GI | 86748405 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTGC GTGTCGGCTA TGAAATGCTC TACGATTTCC CGCAGCCGAC GCCGATGCTG
ATCGTGCTGG GAACTCATTT CACGCGCGCC TCCGACGTCA TCGTGCCCGA CTATCTCACC
GTCGACCCGC CGGTCGCGAT CACGCCCTAT CGCGACATGT TCGGGAATTG GTGCAGCCGG
CTGGTGGCGC CCGCGGGCCG GGTGCGGTTC GCGGCGGACG GTATCGTCCG TGATCTCGGT
GTGCCGGACC CGGTGGTGCC GTCGGCGATC CAGCATGCCG TCGAGGATCT GCCCGCCGAC
ACCATCGTCT ATCTGCTCGG CAGCCGCTAT TGTGAGACCG ACCTGCTGTC CGATACAGCC
TGGAAGATGT TCGAGACCAC GCCGCCGGGC TGGCCGCGGG TGCAGGCGAT TTGCGATTTC
GTCCACAACC ACATCAAATT CGATTATCAG CACGCCCGCG CCACCCGCAC CGCGCACGAG
GCGTTCGAGG AAGGCCGCGG CGTCTGCCGC GACTATGCGC ATCTGGCGAT CGCGCTGTGC
CGCTGCATGA ATATCCCGGC GCGCTACTGC ACCGGCTATC TCGGCGACAT GGGCACGCCC
AAGCCCTGGG CCGCCGGCGA TTTCGCCGGC TGGTTCGAGG CCTATCTCGG CGGCCATTGG
CATACCTTCG ATCCGCGCAA CAACGAGCCG CGGCTCGGGC GGGTCCTGAT CGCGCAGGGG
CGCGACGCGG CCGACGTGCC GATCACCCAG ACCTTCGGCC CCAACACGCT GGTCAGCTTC
AAGGTCTGGA CCGACGAGAT CGTCGAGACC GCCAACGGCG TCGCCGGCTT GCGCTGA
|
|---|
| Protein sequence | MKLRVGYEML YDFPQPTPML IVLGTHFTRA SDVIVPDYLT VDPPVAITPY RDMFGNWCSR
LVAPAGRVRF AADGIVRDLG VPDPVVPSAI QHAVEDLPAD TIVYLLGSRY CETDLLSDTA
WKMFETTPPG WPRVQAICDF VHNHIKFDYQ HARATRTAHE AFEEGRGVCR DYAHLAIALC
RCMNIPARYC TGYLGDMGTP KPWAAGDFAG WFEAYLGGHW HTFDPRNNEP RLGRVLIAQG
RDAADVPITQ TFGPNTLVSF KVWTDEIVET ANGVAGLR
|
|---|
| |