Gene RPB_1246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1246 
Symbol 
ID3909180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1425715 
End bp1426320 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content67% 
IMG OID637883140 
Producthypothetical protein 
Protein accessionYP_484867 
Protein GI86748371 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.96129 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAC AGATCGAGAA GACAGGGAAC GGCGCCGGCG GAACGCGGTC GCAGCCGTTG 
AAGTCGGTGA AGAAGGAAGC CGAAACGATG GCGGGTCAGG CGGCGAATGC GGGTCGCGAC
ATCAAGGACC GGGTGGTCGG CCTCGCTGAA GAGACGGTCG ACGCCGCGCG CGCCAAGGCA
GACGATCTGG CCGGCGCCGC CCGCGAGTTC GCCTCGGAAG CCGGCGAGAC GATCAAGCAA
CGCGCCAACG CGCAACGCGA GGCCGGCGCC GACTACATCG GCGGCATCGC CGACGCGATC
CGGCGCGCGT CGCACGAGTT CGACAACGAC GTCCCGATCG CCGGCGTCTA CATGCGCAAG
GCGGCCAACA AGGTGGAGGA GATCTCCGAC ACCGTGCAGC GCGGCGATAT CTCGGATCTG
GTCAAGGGCG TGCAGGATTT CGCCCGCCGC CAGCCGACCG CGTTTCTCGG CCTCGCGGTG
CTGGCCGGCT TCGGCGCGGT GCGCTTCCTG AAGAGTTCGT CGTCGTCCGC GGAGCCGTCC
TATCGCACGG CGTCGCACGA CGGTGGTGGA GACGACAACC GGGGATATCG CGATGACTCC
AAATAA
 
Protein sequence
MAEQIEKTGN GAGGTRSQPL KSVKKEAETM AGQAANAGRD IKDRVVGLAE ETVDAARAKA 
DDLAGAAREF ASEAGETIKQ RANAQREAGA DYIGGIADAI RRASHEFDND VPIAGVYMRK
AANKVEEISD TVQRGDISDL VKGVQDFARR QPTAFLGLAV LAGFGAVRFL KSSSSSAEPS
YRTASHDGGG DDNRGYRDDS K