Gene RPB_1208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1208 
Symbol 
ID3910143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1381257 
End bp1382078 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content70% 
IMG OID637883102 
ProductAlpha/beta hydrolase 
Protein accessionYP_484829 
Protein GI86748333 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.749977 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACCC AGACGATCGA GACGTCCATT GGACGGATCG CCTACCGCCA GTCCGCCGGC 
AGCGGACCGA CCATCGTCCT CATTCACGGC AATTCGGCCT CCTCACGCGC CTTCGCGCCG
CAGCTCGACA GCCCGCTCGG CGCCAAATAT CGCATCCTGG TGCCCGATCT GCCCGGCCAC
GGCGAGTCGG ACGATGCGGC CGATCCGGCC GGCACCTACA ACCTGCCCGG CTATGCCGCC
GTTTTGCGCC AGGTCGTGGC CAGGCTCGAC GCCGCAGATG CGATTTTCGT CGGCTGGAGC
CTCGGCGGGC ACATCGTGCT GGAGGCCGCG CCCGACCTCG CACAGGCCCG CGGCTTTGCG
ATCTTCGGCG CCCCGCCGAT CAGCTTTCCG CCGGCGATGG ACCGGGCGTT CCTGCCGACG
CCGGCGATGG CCTACACCTT CCAGCCCGAA CTCGACGAAG ACCAGGCGCG CGCCTATGTC
GCCGCCGCGT TCCGGCCGGG CGTCGGCGAA CTGCCGGCGG AGATGGTGGC CGACGTGCTG
CGCACCGACG GCCGCGCCCG CGGCCAGCTC GCCGCCAGCA TCCGGCCCGG CGGCTATCGC
GACGAGGTGG CTGTCGCCGC CGACCTGAAG CAGCCGCTCG CCGTGCTGCA CGGCGCCGAG
GAACAGCTCG TCAACGGCGC CTATTTCGAC ACGCTGACGA TGCCGACCTT GTGGCGTGGC
CGGGTGCAGG TGATCGACGA CGCCGGCCAT CTGCCGCAAT GGGAACAGGC GAAGCGCTTC
AACGCGCTGC TCGATGCGTT CGTGACGGAG GCGAACGCTT AG
 
Protein sequence
MQTQTIETSI GRIAYRQSAG SGPTIVLIHG NSASSRAFAP QLDSPLGAKY RILVPDLPGH 
GESDDAADPA GTYNLPGYAA VLRQVVARLD AADAIFVGWS LGGHIVLEAA PDLAQARGFA
IFGAPPISFP PAMDRAFLPT PAMAYTFQPE LDEDQARAYV AAAFRPGVGE LPAEMVADVL
RTDGRARGQL AASIRPGGYR DEVAVAADLK QPLAVLHGAE EQLVNGAYFD TLTMPTLWRG
RVQVIDDAGH LPQWEQAKRF NALLDAFVTE ANA