| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1206 |
|---|
| Symbol | |
|---|
| ID | 3910141 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 1379574 |
|---|
| End bp | 1380068 |
|---|
| Gene Length | 495 bp |
|---|
| Protein Length | 164 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637883100 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_484827 |
|---|
| Protein GI | 86748331 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.651537 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTGCTTCG CCGCCATCCG GAACGCGCTG GCAGCTCTGT ATAGGCCAGA CCTATATAGG
GCACGCAATT GCGTTGGCCT ATCGACGATA GCGATTCTAA CGGCCTCGGG CTTGGGCGGC
TGCAGCGTCG GAGGCAAGGA TGCGGCGTTT GCCCAAATGG ACAGCAGCGA CTTCACAGGC
TCGATCCGCG CCTTGACGCC GCCTGCCGAG AACGGCCCGA CCGAGGCCGA CCTGGCACTG
GCGCGCATGG CGGCGTCCGA TGTGTTGACC AAGGGCGACA AGGATTCCAG TCAGCCGTGG
GAGAATCCTG CGACCGGCGC GCGCGGCTCT GTCACGCCGC TCGCGGCGGC CTATACGGCC
GACGGTCGCT CCTGCCGCGA TTTTCTCGCC AGCTACGTCA AGGACAGATC GGAAAGCTGG
ATGCAGGGCG CGGCCTGCCG CTCGGCGCAG GGGCATTGGG AAATCCGCTC GCTGAAACCA
TGGCGACGCA GCTGA
|
|---|
| Protein sequence | MCFAAIRNAL AALYRPDLYR ARNCVGLSTI AILTASGLGG CSVGGKDAAF AQMDSSDFTG
SIRALTPPAE NGPTEADLAL ARMAASDVLT KGDKDSSQPW ENPATGARGS VTPLAAAYTA
DGRSCRDFLA SYVKDRSESW MQGAACRSAQ GHWEIRSLKP WRRS
|
|---|
| |