| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1153 |
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| Symbol | |
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| ID | 3909241 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 1324796 |
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| End bp | 1326403 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637883047 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_484774 |
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| Protein GI | 86748278 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.332215 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAACT CTGAGTACAC GGACTGGACC GAGACCTCCG TAGCCGTTTC AGTCCAATTA
CGATCACGTC CCCTCTGGAG TGCCTTCATG TCCTGGCCGT CCCGCAATCT CGGCTGCTGT
TTCGATCCGT CGGCGCAACC CGACAAGGTC GCGATCATCG ATCTGCGCCG CCCGGAGCAG
CCGCAGGAGA TCACCTACGC CGCGCTCGAC GCCGCCTGCG ACGCGGTGGC GCGCGGGCTG
CTCGGCCGCG GCCTGACGCG CGGCGACCGC GTCGGCATCC TGTCGCTGAA TTCGGCGCCG
ATGATCGCGG CCTATCTGGG CATCATGCGG GCCGGCCTCG TCGCGGTGCC GATCTCGTTC
AAGCTGGCGC GCGACACCGT CGATTACATC GTCAAGGACG CCGATCTGCG CGCCGTGTTC
CACGATCACG AGCGTGCCGC GACGGTGCCG GACGGCGTGC TCGGCATCGA TTTCGACGCG
CCGGACGGCT ACGCGGCGCT GCTCGACCAT GGCCCGTTCA CCGCGATCGA GCCGCAGGCC
CGCGAGGTCG CCACCATTCT CTACACCTCG GGGTCGACCG GCATGCCGAA AGGCGTGCTG
CTGTCGCACG AATCGCAGAT GTGGGCGCTC GACACCGCGG CGCGCGCCGG CGACCGCTCG
CAGCATCGCT ATATCGTCGC CGCGCCGATG TTCCACATGA ACGCGACGAT CAGCGCCAAG
ACCGCGCTCC ATGCGGGCGC CTCGATGGTG CTGCTGCCGT CGTTCGACGC GCGGCTCTAT
GCGCAGGCGA TCGCCAAATA TCGCGTCACC TGGCTGACCT CGGTGCCGAC CATGCTGGCG
ATGATGGCGC GCGAGCGCGA CCTGATCGCC ACGCTCGATT TCTCCTCGGT CAGCCATGTG
ATGATGGGCT CGGCGCCGCT CACCAAGGCG CTGGTCGAGA AGGTGCAGGG CATCTTCCCG
GGGGCGGCGA TCAGCAACGC CTATGGCACC ACCGAGGCCG GCCCCGGCGT GTTCGGTCCG
CATCCGGACG GCCTGCCGCG GCCGGACACG GCGGTCGGCT ATCCGACCGA GGGCGCGCTC
GCCGAATTGC GCGAGGGCCC CTCGCCGGAC GAGGGCGTGC TCTACATGAA GAACCCGATG
CTGATGGAGG GCTACAACAA CCGGCCGGAG AAGACCGCCG AGGTGATGCG CGACGGCTGG
TATCGCTCCG GCGACATCAT GCGCCGCGAC GCGCACGGCT TCTTCCATTT CCTCGGGCGC
GCCGACGACA TGTTCGTGGT CGGGGGCGAG AACGTCTGGC CCGGCGAGGT CGAGAAACTG
ATCGAGCGGA TGCCCGGCGT GCACCAGGCC GCGGTGGTGC CGGTGCCGGA CGACATCAAG
GGCACGCTGC CGTTCGCCTT CGTGGTGAAG CAGGACGGCG CCGCGATCGA CGAGGCGGCG
GTGAAGACCT TCACCATCGC CAACGGCCCG GCCTTCGCCC ACCCGCGCTT CGTCGAATTC
CGCGCCGCCA TCGCGTTATC GGCGACCAAC AAGCCGGACC GGCGGCTCTT GACCGAGGAA
GCCCAGCAGA TCGCCGCAAA GCGCCGCGCG GCCGGCGAGC GGGGGTGA
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| Protein sequence | MTNSEYTDWT ETSVAVSVQL RSRPLWSAFM SWPSRNLGCC FDPSAQPDKV AIIDLRRPEQ
PQEITYAALD AACDAVARGL LGRGLTRGDR VGILSLNSAP MIAAYLGIMR AGLVAVPISF
KLARDTVDYI VKDADLRAVF HDHERAATVP DGVLGIDFDA PDGYAALLDH GPFTAIEPQA
REVATILYTS GSTGMPKGVL LSHESQMWAL DTAARAGDRS QHRYIVAAPM FHMNATISAK
TALHAGASMV LLPSFDARLY AQAIAKYRVT WLTSVPTMLA MMARERDLIA TLDFSSVSHV
MMGSAPLTKA LVEKVQGIFP GAAISNAYGT TEAGPGVFGP HPDGLPRPDT AVGYPTEGAL
AELREGPSPD EGVLYMKNPM LMEGYNNRPE KTAEVMRDGW YRSGDIMRRD AHGFFHFLGR
ADDMFVVGGE NVWPGEVEKL IERMPGVHQA AVVPVPDDIK GTLPFAFVVK QDGAAIDEAA
VKTFTIANGP AFAHPRFVEF RAAIALSATN KPDRRLLTEE AQQIAAKRRA AGERG
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