| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1141 |
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| Symbol | |
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| ID | 3909229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 1311822 |
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| End bp | 1313072 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637883035 |
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| Product | sarcosine oxidase beta subunit family protein |
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| Protein accession | YP_484762 |
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| Protein GI | 86748266 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | [TIGR01373] sarcosine oxidase, beta subunit family, heterotetrameric form |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.191022 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTATT CGCTGTTCTC GCTTCTCGGC AACACACTCG GCGGCCACAA GGGCTGGAAG
CCGACCTGGC GCGACGCCGC GCCGAAGCCT GCCTACGATG TGGTGATCAT CGGCGGCGGC
GGCCACGGCC TCGCGACAGC CTATTATCTC GCCAGCCGCT ACGGCGTGCG CAACGTCGCG
GTGCTGGAAA AGGGCTGGAT CGGCGGCGGC AATATGGGCC GCAACACCAC CATCATCCGC
TCCAACTATC TGTTGCCCGG CAACATCCCG CTTTACGAGC TGTCGATGAA GCTGTGGGAG
GGGCTGGAGC AGGACTTCAA CTACAACGCC ATGGTCAGCC AGCGCGGCGT GCTGAACCTG
TATCATTCCG ACGCCCAGCG CGACGCCTAT GCGCGGCGCG GCAACGCGAT GCGGCTGCAC
GGCGTCGATG CCGAACTGCT CGACCGCGAC GGCGTGCGCA AACTCTATCC GTTCCTGAAT
TTCGACGACG CGCGGTTTCC GATCCAGGGC GGCCTGCTGC AGGCCCGCGG CGGCACCGCG
CGGCACGACG CGGTGGCCTG GGGCTTCGCC CGCGGCGCCA GCGATCGCGG CGTCGACATC
GTGCAGAATT GCGAAGTCAC CGGCATCACC ATTGTGAACG GCCGGGTCAC CGGGGTCGAG
ACCACGCGCG GCCCGATCGC TGCGGGCAAG GTCGGCATCG CCGTCGCCGG CTCGAGCTCG
CGCGTCGCCG CGATGGCCGG GATGCGGCTG CCGATCGAGT CCTTCGTGCT GCAGGCGATG
GTGTCGGAAG GGCTGAAGCC GATCATCCCC GGCGTCATCA CCTTCGGGGC CGGACATTTC
TATATCAGCC AGTCCGACAA AGGTGGCCTC GTGTTCGGCG GCGATCTCGA CGGCTACAAT
TCCTACGCGC AGCGCGGCAA TCTGCCGACC GTGGAAGACA TCTGCGAGGG CGGCATGGCG
CTGATGCCGG CGATCGGCCG CGCCCGCATC CTGCGCACCT GGGCCGGCCT TTGCGACATG
TCGATGGACG GCTCGCCGAT CATCGATCGC ACGCCGACGC AGAATCTCTA TCTCAATGCC
GGCTGGAACT ACGGCGGCTT CAAAGCCACG CCGGGCTCCG GCCTCGTGTT CGCGCATCTG
CTCGCCCGCG ACGAGCCGCA TCCCGCCGCC GTCGAGTTGC GGCTCGATCG GTTCGCGCGC
GGTGCGGTGA TCGACGAAAA GGGCCAGGGC GCCCAACCGA ATCTGCATTG A
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| Protein sequence | MRYSLFSLLG NTLGGHKGWK PTWRDAAPKP AYDVVIIGGG GHGLATAYYL ASRYGVRNVA
VLEKGWIGGG NMGRNTTIIR SNYLLPGNIP LYELSMKLWE GLEQDFNYNA MVSQRGVLNL
YHSDAQRDAY ARRGNAMRLH GVDAELLDRD GVRKLYPFLN FDDARFPIQG GLLQARGGTA
RHDAVAWGFA RGASDRGVDI VQNCEVTGIT IVNGRVTGVE TTRGPIAAGK VGIAVAGSSS
RVAAMAGMRL PIESFVLQAM VSEGLKPIIP GVITFGAGHF YISQSDKGGL VFGGDLDGYN
SYAQRGNLPT VEDICEGGMA LMPAIGRARI LRTWAGLCDM SMDGSPIIDR TPTQNLYLNA
GWNYGGFKAT PGSGLVFAHL LARDEPHPAA VELRLDRFAR GAVIDEKGQG AQPNLH
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