| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1137 |
|---|
| Symbol | |
|---|
| ID | 3909225 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 1308257 |
|---|
| End bp | 1308946 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637883031 |
|---|
| Product | formyl-methanofuran dehydrogenase subunit C |
|---|
| Protein accession | YP_484758 |
|---|
| Protein GI | 86748262 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0070] Glutamate synthase domain 3 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.165169 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGTCT GTGACCTCGC CGTCAGCTCC GTGCGCGAGC TGAACCAAGC CCTCCACCGG
CTCACGCCGG ACACCAACGA GACCGCGTGG GAGATCGACA ACCCGCAAGG CAAGCACGCC
ATCGGCGTCG GCATCAACGT GCCGGTCGAG ATCGATATCA AGGGCCACGT CGGCTATTAC
TGCGCCGGCA TGAACAAATT CGCCAGCGTG CGAATTCACG GCAATGCCGG CACCGGCGTC
GCCGAGAACA TGATGTCCGG CACCGTGCAT GTGATGGGCG ACGCCAGCCA GTCGGCCGGC
GCCACCGGCT GCGGTGGCCT GCTGATCATC GACGGCGACG CCTCGGCGCG CTGCGGCATT
TCGATGAAGG GCATCGACAT TCTGGTGAAG GGCTCGATCG GCTCGATGAG CGCCTTCATG
GCGCAGGCCG GCAACCTCGT GGTGCTCGGC AACGCCGGCG AAGCGCTCGG CGATTCGATC
TACGAGGCGA CCATCTTCGT CCGCGGCGAG GTCAAAAGCC TCGGCGCCGA CTGCATCGAG
AAGCCGATGA CGGAGGCCGA CCGCGAGCGC CTCGCCGGCC TGCTCGGCCG CGCCGGCCTC
GACGGCGCAG CCAAGGTCGA CGACTTCCGG ATGTATGGCT CGGCGCGCGA GCTCTACCAC
TTCCACGTCG ACAACGCCGC CTCCTACTGA
|
|---|
| Protein sequence | MPVCDLAVSS VRELNQALHR LTPDTNETAW EIDNPQGKHA IGVGINVPVE IDIKGHVGYY
CAGMNKFASV RIHGNAGTGV AENMMSGTVH VMGDASQSAG ATGCGGLLII DGDASARCGI
SMKGIDILVK GSIGSMSAFM AQAGNLVVLG NAGEALGDSI YEATIFVRGE VKSLGADCIE
KPMTEADRER LAGLLGRAGL DGAAKVDDFR MYGSARELYH FHVDNAASY
|
|---|
| |