| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1124 |
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| Symbol | |
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| ID | 3909211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 1294719 |
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| End bp | 1295954 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637883017 |
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| Product | D-amino acid dehydrogenase small subunit |
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| Protein accession | YP_484745 |
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| Protein GI | 86748249 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.548821 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAAGA TCGCTATCAT CGGAGCCGGG ATCACCGGCG TCACAACAGC TTTCACGCTC
CTCGAACGCG GCCATCGCGT GACCGTGTTC GACCGGCATC GCTACGCCGC GATGGAGACC
TCCTATGCCA ATGGCGGCCA ACTCTCCGCG AGCAACGCCG AGGTCTGGAA CAACTGGGCG
ACCGTGCGGA AGGGGCTCGG CTGGCTGTTC CGGAAAGACG CGCCGTTGCT GCTCGATCTG
ACGCCGAGCT GGCATAAATA CTCCTGGCTG ACGGAATTCC TGGTCGGCAT CCGGAAGTAC
GAGAAGAACT CGATCGAGAC CACCAAGCTC GCGATCGAAG CCCGCCGGCA TTTGTTGCGC
ATGGCGAAGA CGGCGTCGGT CGATTTCGAC ATCGAGACCC GCGGCATCCT GCACGTCTAT
CACGACGCGC AGGATTTCGC CCAGGCGGCG AAGTCCAACA AGATGCTGCA GGCGGGCGGC
CTCGAGCGCA GGCCGGTCAC CCGCCAGGAA ATCCGCGCGA TCGAGCCCGC ATTGACCGGC
AAGTTTCACG GCGGGTTCTA CACGCCGTCG GATTTCAGCG GCGACATCCA CAAATTCGTC
ACCGGGTTGA CGGCGTATTG CGCGCACAAC GGCGTCGAGT TCCGGCTCGG CAAGAACGCG
GAGGTGAGCG CCGAAAGGCA CGGCGGAATC CGCGTCGACT GGTCGTCGGA GCCGATCGGT
TCGCCTGGCG GGTTCGCGTT AAAGGAGAGC TTCGACGCCG TGGTGGTCTG CGCGGGCGTC
GAAAGCCGGC TGCTGGCGAT GGCGCTGGGA GACCGGGTCA ACGTCTACCC CGTGAAAGGC
TATTCGATCA CCGTGCAGCT CGACAGCGAG TCCGACCGGG CCGCAGCACC GCACGTGAGC
CTGCTCGACG AGCGCGCGAA GATCGTCACC AGCCGGCTCG GCAGCGACCG CTTCCGGGTC
GCCGGCACCG CCGAGATCAA CGGGTTCAAC CGCGATATCA GGTCGGATCG GATCAGGCCG
CTGGTCGACT GGGTGGAGCG CGTCTTTCCA GGCGTGAGCA CGCGCCGGGT CGTGCCCTGG
AGCGGGCTAC GGCCGATGAT GCCCGACATG ATGCCGCGCG TCGGGCGTGG CCGGCGCAAG
GGCGTGTTCT ACAACACCGG GCATGGTCAC CTCGGTTGGA CGTTGTCGGC GGCCACGGCG
GAGCTCGTCG CGATGCAGAT CGGCCCAGCC GGCTGA
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| Protein sequence | MSKIAIIGAG ITGVTTAFTL LERGHRVTVF DRHRYAAMET SYANGGQLSA SNAEVWNNWA
TVRKGLGWLF RKDAPLLLDL TPSWHKYSWL TEFLVGIRKY EKNSIETTKL AIEARRHLLR
MAKTASVDFD IETRGILHVY HDAQDFAQAA KSNKMLQAGG LERRPVTRQE IRAIEPALTG
KFHGGFYTPS DFSGDIHKFV TGLTAYCAHN GVEFRLGKNA EVSAERHGGI RVDWSSEPIG
SPGGFALKES FDAVVVCAGV ESRLLAMALG DRVNVYPVKG YSITVQLDSE SDRAAAPHVS
LLDERAKIVT SRLGSDRFRV AGTAEINGFN RDIRSDRIRP LVDWVERVFP GVSTRRVVPW
SGLRPMMPDM MPRVGRGRRK GVFYNTGHGH LGWTLSAATA ELVAMQIGPA G
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