| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1041 |
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| Symbol | |
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| ID | 3909165 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 1196131 |
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| End bp | 1197747 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637882934 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_484662 |
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| Protein GI | 86748166 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCTTT CGCGCTTCGA GATCAACCGC CGGACCGTCC TGCTGACGTC GGCCGCCATC
GCCGCCAATG TGATCAATCC GATGCGGGCG TTCGCGCAGG AAACGCCGCG CAAGGGCGGC
GTGTTCAACG TTCATTACGG CGCCGAGCAG CGCCAGCTCA ACCCCAGCTT GCAGGCCTCG
ACCGGCGTCT ACATCATCGG CGGCAAGATC CAGGAGCCGC TGGTCGATCT CGACGCCGCC
GGCAATCCGG TCGGCGTGCT GGCCGAGAGC TGGGACTCGA CGCCCGACGG CAAGACCATC
ACCTTCCGGC TGCGCAAGGG CGTCACCTGG CACGACGGCA AGCCGTTCAC CTCCGAGGAC
GTCGCCTTCA CCGCGATGAA CATGTGGAAG AAGATCCTCA ATTACGGATC GACGCTGCAG
CTGTTCCTGA CCGCGGTCGA CACCCCCGAT CCGCAGACCG CGATCTTCCG CTACGAGCGG
CCGATGCCGC TGAACCTGCT GCTGCGCGCG CTGCCCGACC TCGGCTACAT TTCGCCGAAG
CACATCTACG AGACCGGCGA CATCCGCCAG AACCCGGTCA ATCTCGCGCC GATCGGCACC
GGCCCGTTCA AGTTCAACAA ATACGAGCGC GGCCAGTACA TCATCGCCGA CCGCAACGAC
AATTACTGGC GGCCGAACGC GCCCTATCTC GACCGCATCG TCTGGCGGGT GATCACCGAC
CGCGCCGCGG CGGCGGCCCA GCTCGAAGCC GGCAGCCTGC ATCTCAGCCC GTTCTCGGGT
CTCACGATCT CCGACATGGC GCGGCTCGGC AAGGACAAGC GTTTCGTCGT CTCGACCAAG
GGCAACGAGG GCAACGCCCG CACCAACACG CTGGAATTCA ACTTCCGCCG CAAGGAGCTG
TCGGACATCC GCGTCCGCAA GGCGATCGCG CACGCGATCA ACGTGCCGTT CTTCATCGAG
AACTTCCTCG GCGATTTCGC CAAGCTCGGC ACCGGGCCGA TCCCCTCGAC CTCGACCGAC
TTCTATCCGG GCCCGAACAC GCCGCAATAT CCGTACGACA AGAAGAAGGC GATCGCGCTG
CTCGACGAGG CCGGGCTGAA GCCGGCCGCC GGCGGCAACC GCCTCACGTT GCGGCTCTTG
CCGGCGCCGT GGGGCGAGGA CATCTCGCTG TGGGCGACCT TCATCCAGCA GTCGCTGGGC
GAAGTCGGCA TCCAGGTCGA GGTGGTGCGC AACGACGGCG GCGGCTTCCT CAAGCAGGTC
TATGACGAAC ACGCCTTCGA CCTCGCCACC GGCTGGCATC AATATCGCAA CGACCCCGCG
GTCTCGACCA CGGTGTGGTA TCGCTCCGGC CAGCCCAAGG GCGCGCCCTG GACCAATCAA
TGGGGCTGGA AGGACGAGGC GATCGACAAG ATCATCGACG ACGCCGCCAC CGAGGTCGAT
CCGGTCAAGC GCAAGGCGCT GTATGCCGAC TTCGTCACCC GCGCCAATGG CGAGCTGCCG
CTGTGGATGC CGATTGAGCA ATTGTTCGTC ACGGTGATCA GCGCGAAGGC ACGCAATGCC
TCCAATAATC CACGCTGGGC GTCGTCGACC TGGCACGATC TTTGGCTGGC CGAATAG
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| Protein sequence | MALSRFEINR RTVLLTSAAI AANVINPMRA FAQETPRKGG VFNVHYGAEQ RQLNPSLQAS
TGVYIIGGKI QEPLVDLDAA GNPVGVLAES WDSTPDGKTI TFRLRKGVTW HDGKPFTSED
VAFTAMNMWK KILNYGSTLQ LFLTAVDTPD PQTAIFRYER PMPLNLLLRA LPDLGYISPK
HIYETGDIRQ NPVNLAPIGT GPFKFNKYER GQYIIADRND NYWRPNAPYL DRIVWRVITD
RAAAAAQLEA GSLHLSPFSG LTISDMARLG KDKRFVVSTK GNEGNARTNT LEFNFRRKEL
SDIRVRKAIA HAINVPFFIE NFLGDFAKLG TGPIPSTSTD FYPGPNTPQY PYDKKKAIAL
LDEAGLKPAA GGNRLTLRLL PAPWGEDISL WATFIQQSLG EVGIQVEVVR NDGGGFLKQV
YDEHAFDLAT GWHQYRNDPA VSTTVWYRSG QPKGAPWTNQ WGWKDEAIDK IIDDAATEVD
PVKRKALYAD FVTRANGELP LWMPIEQLFV TVISAKARNA SNNPRWASST WHDLWLAE
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