| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1040 |
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| Symbol | |
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| ID | 3909164 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 1195129 |
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| End bp | 1196106 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637882933 |
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| Product | binding-protein dependent transport system inner membrane protein |
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| Protein accession | YP_484661 |
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| Protein GI | 86748165 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.314534 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTATCC TGAATCTTGC GGGGCGGCGA CTCGCCGCCT CGATCCCGAC CTTGCTGCTG
ATCCTGATCG GCATCTTCCT GCTGCTGCAA TTCGCGCCCG GCGACACCGT CGACGCGATG
ATGGCGCAGA TGGGCGGCGG CGACGCCGCG ACCGCGCGCG AGCTGCGGCA GTTCTACGGG
CTCGATCTGT CGATCCCGAT GCAGCTCGGC AACTATCTGT GGCGGCTGGT GCGGTTCGAT
CTCGGCTTCT CGTCGATCTA CGGCAAGCCG GTCGCGACCG TGATCCTGGA GCGGCTGCCG
CCGACGCTGC TGTTGATGAC CGCGTCGCTG TCATTCGCGT TCTTCGCAGG CCTGGTGCTC
GGCGTGATCG CCGCGCGCGG CGTCAACAAA TGGCCGGACA CGCTGATCTC CACGCTCGGC
CTGATCTTCT ACGCGACGCC ATCCTTCTGG TTCGGCCTGA TGGCGATCGT GGTGTTCTCG
GTCTATCTGC AATGGCTGCC GGCCGGCGGC TTCGAGGATA TCGGCGCGGC CTCGACCGGG
CTCGCCCGGA CGCTCGACAT CGCCAGCCAT CTGGTGCTGC CGACGCTGAC GCTGGGGCTG
ATCTTTCTGG CGATCTATCT GCGGATCATG CGCGCCTCGA TGCTCGAAGT GCTCAATCTC
GATTTCGTCC GCACCGCCCG CGCCAAGGGC CTCGACGAGA CCCGCATCGT CGTCCGCCAC
GTGCTGCGCA ACGCGCTCTT ACCGATGGTG ACGCTGATCG GGCTGCAGGC CGGCACCATG
CTGGGCGGCT CGGTGGTGGT CGAAAGCGTG TTCTCGCTGC CGGGCCTCGG CCGGCTCGCC
TATGAGTCCG TGGTGCAGCG CGACCTCAAC ACGTTGCTCG GCATCGTGTT CGTCTCGGCG
CTCTTGGTGA TCGCCGTCAA CTTCCTGGTC GACCTCTTAT ATGCGCGGCT CGACCCGCGC
ATCACCGCCG GGACGTGA
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| Protein sequence | MRILNLAGRR LAASIPTLLL ILIGIFLLLQ FAPGDTVDAM MAQMGGGDAA TARELRQFYG
LDLSIPMQLG NYLWRLVRFD LGFSSIYGKP VATVILERLP PTLLLMTASL SFAFFAGLVL
GVIAARGVNK WPDTLISTLG LIFYATPSFW FGLMAIVVFS VYLQWLPAGG FEDIGAASTG
LARTLDIASH LVLPTLTLGL IFLAIYLRIM RASMLEVLNL DFVRTARAKG LDETRIVVRH
VLRNALLPMV TLIGLQAGTM LGGSVVVESV FSLPGLGRLA YESVVQRDLN TLLGIVFVSA
LLVIAVNFLV DLLYARLDPR ITAGT
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