| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_1014 |
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| Symbol | |
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| ID | 3909138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 1163194 |
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| End bp | 1164159 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637882907 |
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| Product | PDZ/DHR/GLGF |
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| Protein accession | YP_484635 |
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| Protein GI | 86748139 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTTCCT TGCCCGAATG GAACGTGCCG GCCGCGATCC GGCCGCGCGC TGCGGACTTT
CCGTTCGATC TCGATCGCAC GCTGTCGGCG GTGCTCGGCG TGCACGCGAT CATTCCGCCC
GACGCCTTCA CCGCGAATAC GCTCGGCACC GAACGCGCCG GCAACGCCGT GCTGATCGAC
GACGGCCTGC TGCTGACCAT CGGCTATCTG ATCACCGAAG CAGAGACCGT CTGGCTGCAT
CTCGGCGACG GCCGGGCGGT CGAGGGGCAC GCGCTCGGCA TCGATTCCGA CAGCGGCTTC
GGCCTGGTGC AGGCGCTCGG CGCGATCGAC CTGCCGCCGC TGCGGCTCGG CCATTCGAGC
GCGGCCAAGA CCGGCGATCG CGTGATCGTC GGCGGCGTCG GCGGACGTAT CCGCTCGGTC
GCGGGGCGGA TCGCGGCGCG GCAGCCCTTC GCCGGCTATT GGGAATATCT GATCGACGAC
GCGATCTTCA CCGAGCCGTC GCACCCGAAC TGGGGTGGGG CCGGGCTGAT CTCCGCGACC
GGCGAACTGA TCGGCATCGG CTCGCTGCAG ATCGAGCGCA GCGGCAGCGA CGAGCACTAC
AACATGATGG TGCCGATCGA TCTCTTGAAG CCGGTGCTCG GCGATCTGCG CAAATTCGGC
CGGGTCGACA GACCGCCGCG GCCGTGGCTC GGGCTGTATT CGACCGAGAT CGAGGACCGG
ATCGTCGTGG TCGGGATCGC GCCGAAGGGC CCCGCCGCGC GCGCCGAGCT GAAATCGGGC
GATGTCATTC TCGCGGTCGC CGGCGACAAG GTCACGAGCG AGGCGGAATT CTATCGCAAG
GTCTGGGCGC TCGGCGCCGC CGGCGTCGAG GTCCCGCTGA CGCTGTTCAG CGGCGGCGCC
ACCTTCGACG TCGTGCTGCA TTCGGCGGAC CGCGCCAAAT TCCTCAAGGG ACCGCGGATG
CATTGA
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| Protein sequence | MPSLPEWNVP AAIRPRAADF PFDLDRTLSA VLGVHAIIPP DAFTANTLGT ERAGNAVLID
DGLLLTIGYL ITEAETVWLH LGDGRAVEGH ALGIDSDSGF GLVQALGAID LPPLRLGHSS
AAKTGDRVIV GGVGGRIRSV AGRIAARQPF AGYWEYLIDD AIFTEPSHPN WGGAGLISAT
GELIGIGSLQ IERSGSDEHY NMMVPIDLLK PVLGDLRKFG RVDRPPRPWL GLYSTEIEDR
IVVVGIAPKG PAARAELKSG DVILAVAGDK VTSEAEFYRK VWALGAAGVE VPLTLFSGGA
TFDVVLHSAD RAKFLKGPRM H
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