Gene RPB_1003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1003 
Symbol 
ID3909127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1148691 
End bp1149212 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content71% 
IMG OID637882896 
Productflavin reductase-like, FMN-binding 
Protein accessionYP_484624 
Protein GI86748128 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATCC GCCCCGCCGC GCTGCATCGC GAATCCGCCG CCGACAGCTT CAAGGCGGCG 
ATGCGCCACC TCGCCGGTGG CGTCAGCATC GTCACCAGCG GGCAGGACGA CGAGCGCAAC
GGCATCACCG CGACGTCGGT CAGTTCGCTC TCGGCCGAGC CGCCGGCGCT GATCGCCTGC
ATCAATCGCA GCTGCGCGCT GCTGCCGGTG ATCCGCGAGC GGGGCACGTT CGGCGTCAAC
ATCCTCGCCG CCGGCCATCG CGACCTCGCC GACCGCTTCG CCGGCCGCCA CGGCGTGCGC
GGAGCGGAGC GCTACGCCGA CGGCGACTGG ATCGAACTGG TGACCGGGGC GCCGCTGCTG
AGCGATGCGC TGGCGGCGAT CGACTGCACG GTCGACAGCA TCATCGACTG GAACAGCCAC
GCGCTGGTGA TCGGCCGGGT CGAGGCCGTG CAGCTCGGCG GCGCCTCGCA GGCGCTGGTG
TATTGGCGCG GCGGCTATCA CGACATCGGC GGCACCGAGT AG
 
Protein sequence
MNIRPAALHR ESAADSFKAA MRHLAGGVSI VTSGQDDERN GITATSVSSL SAEPPALIAC 
INRSCALLPV IRERGTFGVN ILAAGHRDLA DRFAGRHGVR GAERYADGDW IELVTGAPLL
SDALAAIDCT VDSIIDWNSH ALVIGRVEAV QLGGASQALV YWRGGYHDIG GTE