| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0995 |
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| Symbol | |
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| ID | 3909292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 1138773 |
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| End bp | 1140155 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637882888 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_484616 |
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| Protein GI | 86748120 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.537701 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.314251 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCCGC GTGAACTCGT TGCGCTGCGC AACTATCTCG CAGCCGGCCT GAGCGACCGC
ACGCTCTCGG ACGCCAGCGA CAGCGTCGCG ATGGCGGAGG TCGCGCGCGG CACCGCGCTC
GGCGGACGGC TGCCCGAATT GGCGGGCCGC TGCGTGCTGC TGTCGCTGGC GACGCAGCTG
ATCAGCGGCA TCGCGATGAT CGAGATCGAC GGCGTCGCGC GCCGGATGCT GCTGTGCCCG
CCCGATTTCG ACATGAAATA CGCGCCCGAC CTGATCGCCG ACGCGCAGAT CGACGCCGTC
GTCACCGACG ATCCGGCGCG CTGGCAAAGC TTGGGCATCG AACTGATCGT CACCGCCGGC
CTGCCGCTGC GGCCGGCCAA GCCGATCGAA CTCACGCACG CCACCCAATG GTTGATGCTG
ACCTCCGGCA CCACCGGCGC GCCGAAGATC GTGGCGCATA CGCTGGCGGC GCTGACCGGC
GCGATCGTCG CCGATGGGAC CGCACCGGGC GCGCCGCCGA CCTGGGCGAC GTTCTACGAC
ATCCGCCGCT ATGGCGGGCT GCAGATCTTC CTCCGCGCCG TGCTCGGCGG CGGCTCGATG
GTGCTGTCCT CGCCCGGCGA AGCGCTCGTC GATCATCTGG CGCGGCTCGC CGCGCGCGGC
GTCACGCATA TTTCCGGCAC GCCGTCGCAT TGGCGCAAGG CGCTGATGAG CGCCGCGCTG
GCGTCGTTCA GTCCGGACTA CGTCCGACTG TCCGGCGAGA TCGCCGATCA GGCGGTGCTC
GACAGCCTGC GCCGCGCCTT CCCGAGCGCC TCGATCGGCC ACGCTTACGC CTCCACCGAG
GCCGGCGTCG GCTTCGCCGT CAATGACGGC CGCGAAGGTT TCCCCGCGTC GATGATCGGC
GCCGGCCCCA ATGGCGTCGA CATGCAGGTG ATCGACGGCT CGCTGCGGAT CCGCTCCGGA
CGCACCGCGC ACACTTATGT CGGGCGCAGC GCGCCGGCGC TGACCGACGC CGACGGCTTC
GTCGACACCG GCGATATGGT CGAACTGCGC GACGATCGTT ACTACTTCGT CGGCCGGCGC
GACGGCGTCA TCAATGTCGG CGGCCTCAAG GTGCATCCCG AAGAGGTCGA AGCCGTGATC
AACCGCCATC CCGCGGTGCG GATGTCGCGG ATTCGCGCGC GGCGCAGCCC GATCACCGGC
GCGCTGGTGG TCGCCGACGT GATGCTGGCG AGCGTCTCCG ATTCCGGCCG CACCGGCGAG
ATCCGGGAGG CGATCCTCGC CGATTGCAAG GCGTCGCTGC CGCCCCACAA GGTCCCGGCG
ATGGTGAACT TCGTCCAGCA GCTCGACGTC ACCGCCTCCG GCAAGCTGGC CCGCCATGCG
TAA
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| Protein sequence | MSPRELVALR NYLAAGLSDR TLSDASDSVA MAEVARGTAL GGRLPELAGR CVLLSLATQL
ISGIAMIEID GVARRMLLCP PDFDMKYAPD LIADAQIDAV VTDDPARWQS LGIELIVTAG
LPLRPAKPIE LTHATQWLML TSGTTGAPKI VAHTLAALTG AIVADGTAPG APPTWATFYD
IRRYGGLQIF LRAVLGGGSM VLSSPGEALV DHLARLAARG VTHISGTPSH WRKALMSAAL
ASFSPDYVRL SGEIADQAVL DSLRRAFPSA SIGHAYASTE AGVGFAVNDG REGFPASMIG
AGPNGVDMQV IDGSLRIRSG RTAHTYVGRS APALTDADGF VDTGDMVELR DDRYYFVGRR
DGVINVGGLK VHPEEVEAVI NRHPAVRMSR IRARRSPITG ALVVADVMLA SVSDSGRTGE
IREAILADCK ASLPPHKVPA MVNFVQQLDV TASGKLARHA
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