Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0900 |
Symbol | |
ID | 3909080 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 1036991 |
End bp | 1037617 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637882793 |
Product | OmpA/MotB |
Protein accession | YP_484522 |
Protein GI | 86748026 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGATTC GGCAGATCAA ATTCAGCCTG GCGCTGGCCG CCGTCGTTCT GGTGGGCGGC TCTGGTATCA GCATGACCGC GGCGGAGGCC GGCGAGGTGT CCTCGCAGCA GATTCGCGAT CAGCTCAAGA CCTCCAAGAC CCGCAGCCTG AGCGGAACCC GCGCCGCAAT GAGTCCGGAC GATCTGGCGA CGATCAAGCG GGTCAGCCGG ACCCGGTCGC TGTCGGCCGG CGACCGCGAG CAGATCGCAG CGATTGCCGC CAAGCGCCCG ACGATCGATC TCGAGATCAA TTTCGACTAC AACTCCGCGA CCTTGTCGCC GCGGGCCGAA CCGCAATTGA AGAGCCTCGG CGACGCCCTG ACCAGCAGCG ACCTGAAGAA TTCGATCGTC ATGCTGGCCG GCCATACCGA CGCCAAAGGC GGCGACGATT ACAATCAGAG CCTGTCGGAA CGGCGGGCCG AGGCCGTCAA GCGCTACCTG ATCGAGCGCT ATCGGATCCA GCCGGACAAT CTGGTCGCCG TCGGCTACGG CGAGAAGCAG CTCAAGAGCT CGGCCGAGCC GCTCGCCGCG GAGAACCGCC GCGTCCAGAT CGTCAACATG GCCGAGCACG ACGAGGCGGC GAAGTAA
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Protein sequence | MMIRQIKFSL ALAAVVLVGG SGISMTAAEA GEVSSQQIRD QLKTSKTRSL SGTRAAMSPD DLATIKRVSR TRSLSAGDRE QIAAIAAKRP TIDLEINFDY NSATLSPRAE PQLKSLGDAL TSSDLKNSIV MLAGHTDAKG GDDYNQSLSE RRAEAVKRYL IERYRIQPDN LVAVGYGEKQ LKSSAEPLAA ENRRVQIVNM AEHDEAAK
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