| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0895 |
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| Symbol | |
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| ID | 3909075 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 1030326 |
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| End bp | 1031294 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637882788 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_484517 |
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| Protein GI | 86748021 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAAGC TGTGGATCGA GCTGGCCGCG CCGTCCCGCT GCAGATCGAT GATCGTTTCG
GCCGGCCCGC GCCGCGCCGC GCGCATTGCG CCGAATCTCC CCATCGCCAC CCGCGCGATT
GCGGTTCTCG GATTCGCGGT TCTGGGATTC GCGAATGCGG CGATCGCCGC CGAGAAAGCG
GCGCCGCCGG CGCCGGGCGT GCAGGTCACC GTCGCCAAGG CGACCAACGC CTGCTTCTCC
GACATGGTGC GCGTCACCGG CTTCGTGGTG CCGCGCCGCG AGGCCGCGGT GATCGCCGAC
AGCGACGGCA AGGTCACCGA GGTGCTGGTC CGCGAGGGCG ATCTGGTCAC CGACAATCAG
GAACTGGTGC GCACCGTCGG CGCGACAGGG GCGAAATCGC TGCGCGCGCC GGCCGCCGGA
CTGATCACCG AGTTGCGCAC CGCCGTCGGT GCCCCGGCGT CGCCGCTCGC CGGCCCGGTG
GCGCGCATCG CCGTCGGCAA CGAGATCGAG ATCGAAGCCG AAGTGCCGAG CATCCACGCG
CTCAAAGTCA CGGCCGGCGC GCCCGCGCGC ATCGGCCGCG ACGACGGGCC GGATCTGGTC
GGCAAGGTGC GGCTGATCGC GCCGCAGATC GACCGCAAGA CCCAGCTCGG CAAGGTCCGG
ATCTCGGTCA CCAACACGCC GTCGCTGAAG ATCGGGATGT TCGTCCGCGC CACCATCGAC
GCGCGGCGGA GCTGCGGCGT CGCGATCCCG CGATCGGCGA TCGACCATCT CAAGGTGCAG
GTGGTGAAGG GCGGCACCGT CGAGACCCGC CGGGTCAAGG TCGGGCTGGT GTCCGACAGC
AGCATCGAGA TCCTCGACGG GGTCCGCGAA GGCGAGCTCG TCGTCGCCGA TTCCGGCACC
TCGCTGCACG ACGGCGACCC GATCAAGCCG ATCTTCCTCG ACGAATTCGA CCGATCGCGA
GCACGCTAA
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| Protein sequence | MTKLWIELAA PSRCRSMIVS AGPRRAARIA PNLPIATRAI AVLGFAVLGF ANAAIAAEKA
APPAPGVQVT VAKATNACFS DMVRVTGFVV PRREAAVIAD SDGKVTEVLV REGDLVTDNQ
ELVRTVGATG AKSLRAPAAG LITELRTAVG APASPLAGPV ARIAVGNEIE IEAEVPSIHA
LKVTAGAPAR IGRDDGPDLV GKVRLIAPQI DRKTQLGKVR ISVTNTPSLK IGMFVRATID
ARRSCGVAIP RSAIDHLKVQ VVKGGTVETR RVKVGLVSDS SIEILDGVRE GELVVADSGT
SLHDGDPIKP IFLDEFDRSR AR
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