Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0841 |
Symbol | |
ID | 3909099 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 956435 |
End bp | 957415 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637882734 |
Product | transposase IS116/IS110/IS902 |
Protein accession | YP_484463 |
Protein GI | 86747967 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3547] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.643653 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGCCT CCCCCTCATC GGACAACATC TTCATCGGCA TCGACGTCGG CGGCGCGAGC CTCGACGTGG CATGGCATCG AGGCGGTCGC GCTCATTACG CGAACCGCCC GGACGCGATC GCAGAGCTGG TTCAGCGTCT TGTCGCCGGG CCGCAGTTGA CGCGGATCGC GGTCGAACCG ACCGGCGGCT ACGAGAAGCC GCTGGTCAAG GCGCTGCGCC AAGCGGGTCT GCCGGTCGAG ATTGTGCACA CCTCGCGGTT TGCGGCGTAT CGCACGTTGA TCGGTCAGAA GGCCAAATCG GATACGTCGG ACGCGCGCCT GCTCGCTGCC TATGCGGCGA GTCCCGACGA AATCCGTGGT CGCAAGTCCG ATCACGTCGA ACTCGAGGAA AATCCAGTCC GAGAGGCGCT TCATGAATGC GCCAGCCGCC GTGACCAACT CAAACAGATG ATCCACGCCG AGAGTTGCCG GCTGGCGACG ACGCGGCTCG CCGAGATCCG GCAGGCGATC GAGCAGCACC TCGACATGCT TCGGGCCGAA GACAAACTGC TCCAGCAGAG GATGCAGACC CTGCTCCGCC AGAGCGCCGA CCTGATCGCG GCCCAACGCC TCCTCACCAC CATCAAGGGC ATCGGCGTCA CCTCGGCGAC GACCCTGATC GCCATGGTGC CCGAGCTCGG CCGGGTCGAC AACAAAGCCG CCGCAGCGCT GGTCGGCGTG GCGCCGTTCG TTCGCCAAAG CGGTACGATG ACCGCTCCGG CCCGCATCCG CGGCGGCCGC GCGGCCGTCC GACACATCCT CTACATGGCG GCCGTCGCCG CCAGCCGGCA CAACAAAATC CTGCGACCGT TCTACGAACG CCTGATCGCC GACGGCAAGC CAGTGAAGGT TGCGCTCATC GCCGTGCTCC GCCGGCTCGT CGTGTTCGCC AATGCCGTTC TGAGGTCCGG ACAGCCATGG AAAGGCGCAT CACTGACTTG A
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Protein sequence | MTASPSSDNI FIGIDVGGAS LDVAWHRGGR AHYANRPDAI AELVQRLVAG PQLTRIAVEP TGGYEKPLVK ALRQAGLPVE IVHTSRFAAY RTLIGQKAKS DTSDARLLAA YAASPDEIRG RKSDHVELEE NPVREALHEC ASRRDQLKQM IHAESCRLAT TRLAEIRQAI EQHLDMLRAE DKLLQQRMQT LLRQSADLIA AQRLLTTIKG IGVTSATTLI AMVPELGRVD NKAAAALVGV APFVRQSGTM TAPARIRGGR AAVRHILYMA AVAASRHNKI LRPFYERLIA DGKPVKVALI AVLRRLVVFA NAVLRSGQPW KGASLT
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