Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0811 |
Symbol | |
ID | 3909626 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 927481 |
End bp | 928788 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637882704 |
Product | hypothetical protein |
Protein accession | YP_484433 |
Protein GI | 86747937 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4961] Flp pilus assembly protein TadG |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.563774 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGAAGC TGCTTGATAC CCGTCACATC GGGCGCCTGC CGCGGCGCTT CGGGCGCGAT CGATCCGGCA ATATCGCGGT GATCTTCGCG ATCGCGCTGC TGCCGATCCT CGGCTTCATC GGCGCGGCGA TCGACTACGC GACGGCGAAC CGCATCCGCA CCAAATTGCA GTCGGCGCAG GACGCCGCGG TGCTGCTGGC GGTCAGCAAC TCGGAGATCA ACCGGACGAC GGCGCAGGCC AAGGCCGACG CCGAACAGTT CTTCAACGCT ACGATCGGCG CCTACGGCCT GACCGCGACG ATCAAGATCG AGGTCACCGA AAACGACGGC AAGCGCAGCG CGACCGCGGA TTTCACGTCC ACCGTGACGA CCAATTTCCT CAATCTGATC GGCTATCCGA CGCTGGCGAT CGGCAACCGC TCGACCTCCA CCGTGTCGCG GCCGATCTAC CAGGACTTCT ATCTGCTGCT CGACAATTCG CCGTCGATGG GCGTCGCCGC CACGACGGCC GACATCGCCA CCATGGTCGG CAACACGTCG GACAAATGCG CCTTCGCCTG TCACGACCTG TCGGACTCCA ACAACTACTA CAATCTCGCC AAGAAGCTCG GCGTCAAGAT GCGGATCGAC GTGGTGCGGC AGGCGGTGCA GCAGCTCACC AGCACCGCGA CGCTGATGAC CGCGGTGAAC AACCAGTTCC GGATGGCGGT GTACACGTTG GGCGGCTCCT GCGCGTCGCT GGGATTGACG ACGATCGCCA GCCTGTCGTC GGCCATGTCG AGCGTGCAGA CGGCCGCCGG CGCCATCGAC CTGATGTCGA TCCCGAAGCA GAACTACAAC AACGACCAGT GCACCGACTT CAACAGCGCG CTGGCGGCGA TGAACACGAC GATCCCGTCG TCCGGTACGG GGACCGCGGC GCAGCCGCAG AAATGGCTGT TCTTCGTGTC CGACGGCGTC GCCGATTTCA ACAACCCGTC GGGCTGCACG CAGCCCACCG TGAGCGGCGG CCGCTGTCAG GAGCCGCTGA CGGTCACGCA ATGCAAGGCG ATGAAGGACC GCGGCATCCA GATCGCGGTG CTGTACACCA CCTATTTGGC GCTGCCGACC AACCAGTGGT ACAACGATCA CATCGCGCCG TTCAATGCCG GCCCCTACGG CCCCTCGGTC AACAGCCAGA TCGCCGCCAA GATGAAGAGC TGCGCGTCGC CGGACTTCTA TTTCGAAGTC AGCCCGACCC AGGGCATCTC GGAGGCGATG GACGCGCTGT TCAAGAAGGC GGTGGCGAAG GCGCGGCTGA GCAGCTAG
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Protein sequence | MQKLLDTRHI GRLPRRFGRD RSGNIAVIFA IALLPILGFI GAAIDYATAN RIRTKLQSAQ DAAVLLAVSN SEINRTTAQA KADAEQFFNA TIGAYGLTAT IKIEVTENDG KRSATADFTS TVTTNFLNLI GYPTLAIGNR STSTVSRPIY QDFYLLLDNS PSMGVAATTA DIATMVGNTS DKCAFACHDL SDSNNYYNLA KKLGVKMRID VVRQAVQQLT STATLMTAVN NQFRMAVYTL GGSCASLGLT TIASLSSAMS SVQTAAGAID LMSIPKQNYN NDQCTDFNSA LAAMNTTIPS SGTGTAAQPQ KWLFFVSDGV ADFNNPSGCT QPTVSGGRCQ EPLTVTQCKA MKDRGIQIAV LYTTYLALPT NQWYNDHIAP FNAGPYGPSV NSQIAAKMKS CASPDFYFEV SPTQGISEAM DALFKKAVAK ARLSS
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