Gene RPB_0762 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0762 
Symbol 
ID3909250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp856192 
End bp856587 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content67% 
IMG OID637882654 
Productputative flagellar protein FliS 
Protein accessionYP_484384 
Protein GI86747888 
COG category[N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1516] Flagellin-specific chaperone FliS 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.630457 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAACC ACGCCCGCCT TCACGCGGCT CAGGCCTATC GCAGCGCCGC CGTCGCCGTT 
CCGCCGCTGC GCGCGGTGGC GATGCTGCTC GACGGCGCCA TCAAGGCGCT GCAGAGTTCG
ATCGCCGCCA CCGAGCAGAA GCGGTTCGAG GAAAGCCACA CGCAGATGAT CCGCGCGACG
GCGATCCTGC GCGGCCTGAG CCACCATCTG AATTTCGACA AGGGCGGTGC GGTCGCCGAG
GGGCTGCACC AGACCTATCA CAGCCTGATC ATGGCCTGCC TGCGGTCCTA TGGCCGGCCG
AATTCGGCGG ACTGCTACAA GCGCATCATC GGCAGCCTGA TGGAGTTGCG GAACGCCTGG
GCCTATGTCG CCCTCGAGGC CGCGAAGGCG GGCTGA
 
Protein sequence
MQNHARLHAA QAYRSAAVAV PPLRAVAMLL DGAIKALQSS IAATEQKRFE ESHTQMIRAT 
AILRGLSHHL NFDKGGAVAE GLHQTYHSLI MACLRSYGRP NSADCYKRII GSLMELRNAW
AYVALEAAKA G