Gene RPB_0754 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0754 
Symbol 
ID3909242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp845525 
End bp846352 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content72% 
IMG OID637882646 
ProductIclR family transcriptional regulator 
Protein accessionYP_484376 
Protein GI86747880 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.498263 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGCGG ACAGCGCCGG CGATGCCGCG TTCGCCACCA CGCTCGCCAA GGGCCTGATC 
GTGCTCGAAG CGTTCGACGC CGGCACGCCG CTGCTCGGCA ACATGGAGAT CGCGGTGCGC
ACCGGCATCC CGCGGCCGAC GGTGGCGCGG CTGACGCATA CGCTCGCCGA ACTCGGCTAT
CTGCGGTTCG ACCCTGCGCT GTCGAAATAC GGCGTCGGCC CCCGGGCGCT GCGGATGGCG
CATCCGCTGC TCGCCGACAT GCCGTTCCGT CAGCTCGCCC GGCCCCTGAT GCAGGATCTG
GCGGCGAGCG TGCGCGGCAC CGTCTCGATC GGCCTGCTCG ACGGCCCGTC GGTGATCTAT
GTCGAAACGG CTCGCTCCGG CGATGTTGGC CCGCACAGCC CGGACATCGG CATGCCGATC
CCGGTGGTGC GCACCGCGAT GGGCCGTGCC GCAGCGTCGC TGCTGCCGCC CGACGAGGCC
GAGCTGCTGG CGCGGCGGAT CGCTGCGGCC GACCGCTCGG CGTGGGAGCG CGACGGCGAG
TTGTATCGCG CCGGCCTGGC GCAATGCGCG CAGCGCGGCT TCTGCACCTG CTTCGGCGAC
TACATGCCGT CGATCCACGC CGTGGCGGCG CCGCTGTTCC GCTCCAGCCG CTTGAAGCGG
ACGTTTGCGA TCAATTGCGG CATCCCGGAA TTCCGGCTGC AGCCGGGCCA GCTCGAAGCC
GAGATCGGCC CGCGCATCCG CGCGCTCGCG GCCGCCATCC GCGCGATGTT TCACGAAGCC
GACGCCGCGG CCGCGCCACG GTTGCGGCAG AGCCGGAACG CGAGGTGA
 
Protein sequence
MLADSAGDAA FATTLAKGLI VLEAFDAGTP LLGNMEIAVR TGIPRPTVAR LTHTLAELGY 
LRFDPALSKY GVGPRALRMA HPLLADMPFR QLARPLMQDL AASVRGTVSI GLLDGPSVIY
VETARSGDVG PHSPDIGMPI PVVRTAMGRA AASLLPPDEA ELLARRIAAA DRSAWERDGE
LYRAGLAQCA QRGFCTCFGD YMPSIHAVAA PLFRSSRLKR TFAINCGIPE FRLQPGQLEA
EIGPRIRALA AAIRAMFHEA DAAAAPRLRQ SRNAR