Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0734 |
Symbol | |
ID | 3910030 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 823882 |
End bp | 824721 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637882626 |
Product | periplasmic binding protein |
Protein accession | YP_484356 |
Protein GI | 86747860 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.838068 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGCCC GCGCGTGGCT CGCGCTCGCG CCGGCGTTGA TCGCGGCTCT GTCGACCGCG GCGATCGCCG CGCCGCGGCC GCGGCTCGCA TCGATCAATG TCTGCACCGA TCAGTTGCTG ATCGCGCTCG CCGATCCGGA TCAGATCCTC GGTCTCAGCC CCTATGCGCG CGACGCGGCG CAATCCTATC TGGCCGCTCA GGCCGGACGG TTTCCGAAGC TGTCGGGCGA GGCCGAAGAC GTGCTGATGC TAAAACCCGA CATCGTCGTC GGCGGCCGCT ACACGCGGCG GGCGACGCGG GAATTCCTGA AGCAGCAGGG CCAGCGCGTC GTCGAATTCG ACGCGGCGCG CACGCTCGAC GAGGCGAGGG CGCAGATCAC GATGATGGGC GACCTGGTCG GCCATCCGGA TCGCGCGGCC GCCGCCAATG CACGGATCGA CGCCGCCATC GCGCGGGCGC GGAAAGCCAC GTCCGACAAG CCGTTTCGCG TGCTGCCGCT GGAGCGGCGT GGCTGGGTGT CGGGCAGCGG CAGCCTGATC ACGTCGTTGC TGGCGACGGT GGGGCTGGTC AACGCCGCCG ATGGGCTCGG CATCAGGCTC GGCGGCTTCG CCTCGCTCGA AGCGGTGGTG AGCCTGCGGC CGGACTATCT GCTGGTGTCG GAGGCGAGCG ATTTCGCCGA GGACGAAGGC CGCGCCTTCG TGCTGCACCC GGCGCTCGAA GGCTTGTTTC CGCCGTCGAA GCGCCTCACG ATTCCGGAAA ATCTCACCGT GTGCGGCGGG CCGATGCTGG CCGATGCGCT CGATCGATTG ACCACCGAAC TGACGCGGCT GGAGCGCTGA
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Protein sequence | MRARAWLALA PALIAALSTA AIAAPRPRLA SINVCTDQLL IALADPDQIL GLSPYARDAA QSYLAAQAGR FPKLSGEAED VLMLKPDIVV GGRYTRRATR EFLKQQGQRV VEFDAARTLD EARAQITMMG DLVGHPDRAA AANARIDAAI ARARKATSDK PFRVLPLERR GWVSGSGSLI TSLLATVGLV NAADGLGIRL GGFASLEAVV SLRPDYLLVS EASDFAEDEG RAFVLHPALE GLFPPSKRLT IPENLTVCGG PMLADALDRL TTELTRLER
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