Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0732 |
Symbol | |
ID | 3910028 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 822074 |
End bp | 823099 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637882624 |
Product | transport system permease protein |
Protein accession | YP_484354 |
Protein GI | 86747858 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.807924 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGATGC GTCCAAATCC CGCGTCACGC GCGGCGGCGG TCACGGCCGC GCTCATGATC GTGGTCGGCC TGCTCGCGCT CGGCTCGCTC GGCGTCGGCC CGGTGAAGCT GTCGCCGCTC GCCGTGATCG ATGCGCTGAT CGGCCGTGGC GGCGAGGTGC AGCAGATCAT CGTGCAGCAG ATTCGCCTCC CGCGCGCCAT CCTGGCGCTG GCGATCGGCG GCATTCTCGG CCTGTCCGGC GCGGCGCTGC AGGGCCTGCT GCGCAATCCG CTGGCGTCGC CGTCGCTGTT CGGCGCGCCG CAATCGGCGG CGTTCGGCGC CGTGCTGATC ATTGCGCTGG GCTGGGCCGA TGTCCGCTCC TATGCGTTGC CGGTCGCCGG CATCACCATG GCGTTCGTCT CGGTGTTCGT GCTGCTCACG GTCGCCGGCC GCAGCGCCAG CCTGCTGCTG CTGATCCTCG CGGGACTGGC GATCTCGAGC CTCGCCGGTG CGGCGACCGC GCTGGTGATG AATTTGTCGA ACAATCCGTT CGCCAGCCTC GAAATCGCGT TCTGGCTGCT CGGCTCGCTG GAGGACCGCA GCTTCCGCCA CGTCGCATTG GCGCTGCCCT TCATCGTCGT AGGCGCCGCG CTGCTGTTCA GCCAGCGCGC CGCGTTCCGG GCGCTCAGCC TCGGCGAGGA AACCGCGCAG AGTCTCGGCG TCGACGTCGC GCGCCTGCGG CTGATCGTGA TCGCCGGCAC GGCGCTCGGC GTCGGCGGCG CGGTGTCGGT GTCGGGCACG ATCGGCTTCA TCGGCCTGGT GGCGCCGCAT CTGGTGCGGC CGCTGATCGG CCACGATCCG GCGCGCTTGT TGATCCCGAG CGCGCTCGCC GGCGCCGCGC TGCTGCTCGC CGCCGACATC GCGGTGCGGA TCATTCCGTC GACCACCGAC ATCAAGGTCG GCGTGCTGAC CTCGATCATC GGCGTGCCGT TCTTCCTGTA TCTGATCATG CGCGAGCGCC GCGCGCTGGG CGGAGGCGTC GCATGA
|
Protein sequence | MTMRPNPASR AAAVTAALMI VVGLLALGSL GVGPVKLSPL AVIDALIGRG GEVQQIIVQQ IRLPRAILAL AIGGILGLSG AALQGLLRNP LASPSLFGAP QSAAFGAVLI IALGWADVRS YALPVAGITM AFVSVFVLLT VAGRSASLLL LILAGLAISS LAGAATALVM NLSNNPFASL EIAFWLLGSL EDRSFRHVAL ALPFIVVGAA LLFSQRAAFR ALSLGEETAQ SLGVDVARLR LIVIAGTALG VGGAVSVSGT IGFIGLVAPH LVRPLIGHDP ARLLIPSALA GAALLLAADI AVRIIPSTTD IKVGVLTSII GVPFFLYLIM RERRALGGGV A
|
| |