Gene RPB_0732 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0732 
Symbol 
ID3910028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp822074 
End bp823099 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content71% 
IMG OID637882624 
Producttransport system permease protein 
Protein accessionYP_484354 
Protein GI86747858 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.807924 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATGC GTCCAAATCC CGCGTCACGC GCGGCGGCGG TCACGGCCGC GCTCATGATC 
GTGGTCGGCC TGCTCGCGCT CGGCTCGCTC GGCGTCGGCC CGGTGAAGCT GTCGCCGCTC
GCCGTGATCG ATGCGCTGAT CGGCCGTGGC GGCGAGGTGC AGCAGATCAT CGTGCAGCAG
ATTCGCCTCC CGCGCGCCAT CCTGGCGCTG GCGATCGGCG GCATTCTCGG CCTGTCCGGC
GCGGCGCTGC AGGGCCTGCT GCGCAATCCG CTGGCGTCGC CGTCGCTGTT CGGCGCGCCG
CAATCGGCGG CGTTCGGCGC CGTGCTGATC ATTGCGCTGG GCTGGGCCGA TGTCCGCTCC
TATGCGTTGC CGGTCGCCGG CATCACCATG GCGTTCGTCT CGGTGTTCGT GCTGCTCACG
GTCGCCGGCC GCAGCGCCAG CCTGCTGCTG CTGATCCTCG CGGGACTGGC GATCTCGAGC
CTCGCCGGTG CGGCGACCGC GCTGGTGATG AATTTGTCGA ACAATCCGTT CGCCAGCCTC
GAAATCGCGT TCTGGCTGCT CGGCTCGCTG GAGGACCGCA GCTTCCGCCA CGTCGCATTG
GCGCTGCCCT TCATCGTCGT AGGCGCCGCG CTGCTGTTCA GCCAGCGCGC CGCGTTCCGG
GCGCTCAGCC TCGGCGAGGA AACCGCGCAG AGTCTCGGCG TCGACGTCGC GCGCCTGCGG
CTGATCGTGA TCGCCGGCAC GGCGCTCGGC GTCGGCGGCG CGGTGTCGGT GTCGGGCACG
ATCGGCTTCA TCGGCCTGGT GGCGCCGCAT CTGGTGCGGC CGCTGATCGG CCACGATCCG
GCGCGCTTGT TGATCCCGAG CGCGCTCGCC GGCGCCGCGC TGCTGCTCGC CGCCGACATC
GCGGTGCGGA TCATTCCGTC GACCACCGAC ATCAAGGTCG GCGTGCTGAC CTCGATCATC
GGCGTGCCGT TCTTCCTGTA TCTGATCATG CGCGAGCGCC GCGCGCTGGG CGGAGGCGTC
GCATGA
 
Protein sequence
MTMRPNPASR AAAVTAALMI VVGLLALGSL GVGPVKLSPL AVIDALIGRG GEVQQIIVQQ 
IRLPRAILAL AIGGILGLSG AALQGLLRNP LASPSLFGAP QSAAFGAVLI IALGWADVRS
YALPVAGITM AFVSVFVLLT VAGRSASLLL LILAGLAISS LAGAATALVM NLSNNPFASL
EIAFWLLGSL EDRSFRHVAL ALPFIVVGAA LLFSQRAAFR ALSLGEETAQ SLGVDVARLR
LIVIAGTALG VGGAVSVSGT IGFIGLVAPH LVRPLIGHDP ARLLIPSALA GAALLLAADI
AVRIIPSTTD IKVGVLTSII GVPFFLYLIM RERRALGGGV A