Gene RPB_0728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0728 
Symbol 
ID3910024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp818247 
End bp819467 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content66% 
IMG OID637882620 
ProductS-adenosylmethionine:diacylglycerol 3-amino-3-carboxypropyl transferase 
Protein accessionYP_484350 
Protein GI86747854 
COG category[I] Lipid transport and metabolism 
COG ID[COG5379] S-adenosylmethionine:diacylglycerol 3-amino-3-carboxypropyl transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACGC AGCAGCTCAT CGCGGATGCG GTCCGCAACA GCAAGGATCG TAGTGAGTCG 
ACGATCTGGG ATCGTCTGTT TTCGATCTGG TTCCGTCGTC TGGTCTATAC CCAGATCTGG
GAGGACCCCG AGGCGGATCT CGCTGCGCTG CAACTGCCGA TCGGCTCGAC CATCGTCACG
ATCTCGTCGG GCGGCTGCAA CGCGCTGTCC TATCTCACCG CGAAGCCCGC CCAGGTGTTT
GCGGTCGATC TCAACGAGGC GCATCTGGCG CTGCTGAAGC TGAAGCTCGC CGGACTGCGG
GCGCTGCCGG ACTACGAGCA GTTCTGGCGC TTCTTCGGCG AAGGCACTGC CGACGACAAT
TCCGATCTGT ATCGGCAACG GCTGCGGCCG CAGCTCGACG GCGACGCGCG CAGCTATTGG
GACGAGCGCG ACTTCCGCGG CCGCGCGCGC TATCGCTACT TCACCGACGG CTTCTACCGT
CACGGCGCAC TCGGCAGCTT CATCGGCTTC GCGCATCTGC TGGCGAAGTT CGCCAAGATC
GACCTGTCGG CCCTGCTCGA GGCGGCGCCG GAGTCGCCGG AGCGCCAGGC GGCGCTGCAA
CAACTCGACC GACTGTTCCA CTCGCGCTTC GCCAAGCTAT TGACGCGGAC GCCCGCCCTG
CTGTTCAGCC TCGGTATTCC GCCGCAGCAG CGCGAACTGC TCGGCGGCGA CCAGCCGCTC
AACGAGGTGC TGCATCAGCG GCTGCTGCGG CTGATCAACG TCTATCCGAA CGAAACGAAT
TACTTCGCCT GGCAGGCGCT GAGCCGGCGC TATCCGGGCC CCGGCGACAC CTGCCTGCCG
CTGTATCTGC AGCGGAGCCG CTACGCGCAG ATGCGCTCGG GCGCCGGCCT GATCATTCCG
GTGCACCAGA ACCTGCGCGT GTTCCTGGAA AATCTGCCCG CCCGGCAGAT CGACGCCGTG
GTGCTGCTGG ATTCGCAGGA CTGGATGGCG CCGGATGAAA TCCGCGCGCT GTGGGACGCG
ATCGACCGGG CCGGCAAGGA TTCCGTCCGC GTGATCTTCC GCACCGCGGG CGCCGAATCG
CCGCTGGAAA CCGAGCCGCT GGCGCCGCTG CGCGAGGTCT GGCGGCGTGA CGCCGAGCGC
AGCGCGCTGG GCTTCGATCG CGACCGTTCG GGGATCTATG GCGGTTTCCA CTGCTACACA
CGACGCCCCG GCGCGAACTG A
 
Protein sequence
MNTQQLIADA VRNSKDRSES TIWDRLFSIW FRRLVYTQIW EDPEADLAAL QLPIGSTIVT 
ISSGGCNALS YLTAKPAQVF AVDLNEAHLA LLKLKLAGLR ALPDYEQFWR FFGEGTADDN
SDLYRQRLRP QLDGDARSYW DERDFRGRAR YRYFTDGFYR HGALGSFIGF AHLLAKFAKI
DLSALLEAAP ESPERQAALQ QLDRLFHSRF AKLLTRTPAL LFSLGIPPQQ RELLGGDQPL
NEVLHQRLLR LINVYPNETN YFAWQALSRR YPGPGDTCLP LYLQRSRYAQ MRSGAGLIIP
VHQNLRVFLE NLPARQIDAV VLLDSQDWMA PDEIRALWDA IDRAGKDSVR VIFRTAGAES
PLETEPLAPL REVWRRDAER SALGFDRDRS GIYGGFHCYT RRPGAN