Gene RPB_0576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0576 
Symbol 
ID3908269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp647892 
End bp648257 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content67% 
IMG OID637882465 
ProductPilT protein-like 
Protein accessionYP_484198 
Protein GI86747702 
COG category[R] General function prediction only 
COG ID[COG1487] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.198273 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.33721 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCGC AGGGCGAGGC CGAGCGGCTG CATTTGTCGG TCGTCACGGT GGCCGAGATC 
GAGCGCGGCT TGCGCAAGCT CGCCCGCGCC GGCGGCACGG CGCGCGCGCA AGCCTTGTCC
GAATGGCTAC GCGAACTGAT CGACCTCTAT GGCGACCGGC TGCTGCCGAT CGATGCGGCG
ACGGCGCGGA TTGCCGGCGA GATTGAAGAC CAGGCGATTG CCAACGGCGC CCATCCCGGC
TTTGCCGACG TGCTGATCGC AGCGACCGCG CGCGCCCATG CGCTCGACCT GTTGACGGCC
AACATCAAGC ATTTCCGCCC GCTCGGAATC AGCTGCTTCA ATCCGGTCGA CGGGCTTCCG
GACTGA
 
Protein sequence
MIAQGEAERL HLSVVTVAEI ERGLRKLARA GGTARAQALS EWLRELIDLY GDRLLPIDAA 
TARIAGEIED QAIANGAHPG FADVLIAATA RAHALDLLTA NIKHFRPLGI SCFNPVDGLP
D