Gene RPB_0555 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0555 
Symbol 
ID3909594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp625777 
End bp626565 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content70% 
IMG OID637882443 
Productenoyl-CoA hydratase 
Protein accessionYP_484177 
Protein GI86747681 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.323488 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0688647 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACA TCGTCCTGCA GCAGCTCGAC CGCGGCCTGC TCACCATCAC CATGAACCGG 
CCCGACCGGC GCAATGCGCT CAATCAGGAC ATGATCCGCG GGCTGGTCGA GGCGGCGCAT
CGGGCCAAGG ACGATCCGCA GGTCCGCGCG GTGCTGCTGA AGGGCGGCGG CGGCACGTTC
TGCGTCGGCG GCGACGTCAA GTCGATGGCG GCGGCCGGCG ATCCGCCGCC GCTGGAGCAG
AAGGTCGCCA ATCTGCGCCG CGGCATGGAG GTCTCGCGGC TCCTGCATCA GATGCCGAAG
CCCGTGGTGG CGCAGATCGA CGGCGCGGCG GCCGGCGCCG GGCTGTCGAT GGCGCTGGCC
TGCGACCTGC GCGTCGCGGG CGCCTCCGCC AAGATCACCA CCGCCTTCGC CAAGGTCGGC
CTGTCGGGCG ATTTCGGCGG CACCTATTTC CTCACGCATC TGATCGGCGC CGCCAGGGCG
CGCGACCTGT ATCTGACCTC CCCGGTGTTG ACCGCGCCCG AGGCGCTGGC GCTCGGCATC
GTCAGCCGCG TCGTGCCGGA CGCCGAGGTC GAGAGCGCCA CGCGGGATCT GGCGCTGTCG
CTGGCGCAGG GGCCGAGCGT GACGCTCGGC TACATCAAGA CCAACATCAC CAACGCCGAG
ACTCTCTCGC TCGAAGCCTG CTTCGACGCC GAGGCGCTGC ATCATTCGCG CTGCGCCGAG
ACCGCCGACC ACAAGGAAGC CGCCGCGGCC TTTGTGGAGA AGCGCGCGGC CGTGTTTCAG
GGGCGATGA
 
Protein sequence
MTDIVLQQLD RGLLTITMNR PDRRNALNQD MIRGLVEAAH RAKDDPQVRA VLLKGGGGTF 
CVGGDVKSMA AAGDPPPLEQ KVANLRRGME VSRLLHQMPK PVVAQIDGAA AGAGLSMALA
CDLRVAGASA KITTAFAKVG LSGDFGGTYF LTHLIGAARA RDLYLTSPVL TAPEALALGI
VSRVVPDAEV ESATRDLALS LAQGPSVTLG YIKTNITNAE TLSLEACFDA EALHHSRCAE
TADHKEAAAA FVEKRAAVFQ GR