Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0552 |
Symbol | |
ID | 3909591 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 621810 |
End bp | 623303 |
Gene Length | 1494 bp |
Protein Length | 497 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637882440 |
Product | peptidase M48, Ste24p |
Protein accession | YP_484174 |
Protein GI | 86747678 |
COG category | [R] General function prediction only |
COG ID | [COG4784] Putative Zn-dependent protease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.125277 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0387817 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCGCAT CCGAGGGACG GCGCAGCATC TGGAGAAGCC GCCGCTGGCT GGCTGTGCCT GTCCTGGCGG GCGCGCTGGC GCTGGCCGGC TGCGGCGATT TTCGCCGCTT CGAGACCGCG TCGATTCCCT CCAGCACGCC GGCGGCAAAG CCGTCGCGTC CGGCGGCGCA ATCGCCGGCG GCCGAGCGCG AGCACGAGCG CATCCTCGCC ACCTATGGCG GCGCCTATGA CGATCCGAGG CTCGAAGCGC TGATCACCGC GACGGTCGAT CGGCTGGTGG CGGCGTCCGA CCGTCCCGAC CTCACCTACA AGGTGACGAT CCTGAATTCC GGCGCCGTCA ACGCCTTCGC GCTGCCGACC GGGCAGCTCT ACGTCACCCG CGGGCTGGTC GCGCTCGCCA GCGACACCTC GGAACTGTCG TCGGTGCTGT CGCACGAGAT GGCGCATGTG CTGGCCAAGC ACGCCGCGAT CCGGGAGGAC CAGGCGCGCC AGGCGGCGCT GGTCACCCGC GTCGTCACCG ACATGGGCAC CGATCCGGAG ATGACCGCGC TGGCGCTGGC CAAGACCAAG CTGTCGATGG CGAGCTTCTC GCGGCAGCAG GAGCTCGAGG CCGACGGCAT CGGCGTCGGC ATCTCGGCGC GCGCCCAGTT CGATCCGTTC GGAGCTTCGC GTTTCCTCAC CGCGATGGAG CGCAACGCGG CGCTGAAGGC GGGCCGCGGC GATGCGCGCT CGCAGGACTT CCTGGCGTCG CACCCGGCGA CGCCGGAGCG GGTGCGCAAC GCGCAGAACA ACGCCCGGCA ATACGCCTCG CCGGAGCAGA CCGCCAAGGG CGAGCGCGAC CGTGAGACCT ATCTCAACGC CATCGACAAC ATCGTCTATG GCGAGGACCC GAGCGAGGGC TTCGTCCGCG GCCGCCGCTT CCTGCATCCC AAGCTCGGCT TCACCTTCCA GGTGCCGGAG AGCTTCACGC TCGACAACAC CGCGCAGGCG GTGATCGGCA TCCGCGAAGG CGGCAGCCAG GCGATGCGGT TCGACGTGGT GCGGGTGCCG GCGGAACAGT CGCTCGGCGA CTACCTCAAT TCCGGCTGGA TGGAGAACGT CGACAAGAGT TCGACCGAAG AACTAAGCAT CAACGGCTTT CCGACCGCCT CGGTGGCGGC GCGCGGCGAT CAGTGGCAGT TCAAGGTCTA TGCGTTGCGG TTCGGCAGCG ACGTCTATCG CTTCATCTTC GCGACCCGGC AGAAATCGGC CGAAAGCGAC CGCAATTCGC GCGACACCGT GAATTCGTTC CGACGTCTGA CGCTCGACGA GATCCAGGCG GCGCGGCCGT TGCGGATCAA GGTGATCACC GTACAGCCGG GCGACACGGT GGAATCGCTG TCGCACCGGA TGTCCGGCGT CGACCGCCCG CTCGACCGCT TCCGGGTGCT GAACGGCCTC GACGCCAACG CCACCGTGAA GCCGCGCGAT CTGGTCAAGA TCGTGGTGGA TTAA
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Protein sequence | MIASEGRRSI WRSRRWLAVP VLAGALALAG CGDFRRFETA SIPSSTPAAK PSRPAAQSPA AEREHERILA TYGGAYDDPR LEALITATVD RLVAASDRPD LTYKVTILNS GAVNAFALPT GQLYVTRGLV ALASDTSELS SVLSHEMAHV LAKHAAIRED QARQAALVTR VVTDMGTDPE MTALALAKTK LSMASFSRQQ ELEADGIGVG ISARAQFDPF GASRFLTAME RNAALKAGRG DARSQDFLAS HPATPERVRN AQNNARQYAS PEQTAKGERD RETYLNAIDN IVYGEDPSEG FVRGRRFLHP KLGFTFQVPE SFTLDNTAQA VIGIREGGSQ AMRFDVVRVP AEQSLGDYLN SGWMENVDKS STEELSINGF PTASVAARGD QWQFKVYALR FGSDVYRFIF ATRQKSAESD RNSRDTVNSF RRLTLDEIQA ARPLRIKVIT VQPGDTVESL SHRMSGVDRP LDRFRVLNGL DANATVKPRD LVKIVVD
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