Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0496 |
Symbol | |
ID | 3909399 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 554482 |
End bp | 555213 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637882383 |
Product | photosynthetic reaction center protein |
Protein accession | YP_484118 |
Protein GI | 86747622 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0401764 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.747505 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAACCG CAAAACTCCT GGTCGTGGCC GCAGTGATCG GCACCGTCGG CACGACCCAG GCGCTGGCCG CGTGCGAGAT CGCCGACGCC AAGCTCGAAG AGGCGATTCA GGAAAATCCC CGATTTCGCG GGCCGGCGAA CAGTCAGGCC GTGCGCGACC TCCGGAGCCT GCGCGATGCC GCCTTCACGT TGCGATCCTA TGGGCGCCAC GACGACTGCG AGCGTCTGCT CGCCAACATT CGCGAACTGA TCGCCGGGCC GCCGATGGGG TCGCTCGGCG ACAATGACGA GGAGCAGGCG GATATCCAGA ATTCCGCCCG CGAACCGAAA TCCCGGCGCG GGACGCCGGC GGGCAGCCGC GACGACAAGG ATGCCAAGCC GCTGATCAGG ATCGACCAGC TGACGCCCGG TCTGCGGACC GACGAGATGA TCGGGGCGGA AGTCCGCAGT TCCGACGACA AGATCGTCGG CGAGGTCCGC AACATCGTGT TCGGCACCAA GGACGGGCGC GACTACGCGA TCATCGCGTC GGGCGGATTC TTCACCACCG GCAAGGACAG CATCGTGGTG CCGATCCGGT CACTCAAAGT CACGCAGGAT CGATCGAGCT TCTTTCTCCC GATCGTGAAG GACGTGATGG AGACGGTGCC GGTGATGCCC GATCAGGACT ACAACTGGCT CTCGGACCCA AAATGGCGCG CCCGCAACGA CGCGTTCTTC GAGAAGCCCT GA
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Protein sequence | MTTAKLLVVA AVIGTVGTTQ ALAACEIADA KLEEAIQENP RFRGPANSQA VRDLRSLRDA AFTLRSYGRH DDCERLLANI RELIAGPPMG SLGDNDEEQA DIQNSAREPK SRRGTPAGSR DDKDAKPLIR IDQLTPGLRT DEMIGAEVRS SDDKIVGEVR NIVFGTKDGR DYAIIASGGF FTTGKDSIVV PIRSLKVTQD RSSFFLPIVK DVMETVPVMP DQDYNWLSDP KWRARNDAFF EKP
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