Gene RPB_0496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0496 
Symbol 
ID3909399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp554482 
End bp555213 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content65% 
IMG OID637882383 
Productphotosynthetic reaction center protein 
Protein accessionYP_484118 
Protein GI86747622 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0401764 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.747505 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACCG CAAAACTCCT GGTCGTGGCC GCAGTGATCG GCACCGTCGG CACGACCCAG 
GCGCTGGCCG CGTGCGAGAT CGCCGACGCC AAGCTCGAAG AGGCGATTCA GGAAAATCCC
CGATTTCGCG GGCCGGCGAA CAGTCAGGCC GTGCGCGACC TCCGGAGCCT GCGCGATGCC
GCCTTCACGT TGCGATCCTA TGGGCGCCAC GACGACTGCG AGCGTCTGCT CGCCAACATT
CGCGAACTGA TCGCCGGGCC GCCGATGGGG TCGCTCGGCG ACAATGACGA GGAGCAGGCG
GATATCCAGA ATTCCGCCCG CGAACCGAAA TCCCGGCGCG GGACGCCGGC GGGCAGCCGC
GACGACAAGG ATGCCAAGCC GCTGATCAGG ATCGACCAGC TGACGCCCGG TCTGCGGACC
GACGAGATGA TCGGGGCGGA AGTCCGCAGT TCCGACGACA AGATCGTCGG CGAGGTCCGC
AACATCGTGT TCGGCACCAA GGACGGGCGC GACTACGCGA TCATCGCGTC GGGCGGATTC
TTCACCACCG GCAAGGACAG CATCGTGGTG CCGATCCGGT CACTCAAAGT CACGCAGGAT
CGATCGAGCT TCTTTCTCCC GATCGTGAAG GACGTGATGG AGACGGTGCC GGTGATGCCC
GATCAGGACT ACAACTGGCT CTCGGACCCA AAATGGCGCG CCCGCAACGA CGCGTTCTTC
GAGAAGCCCT GA
 
Protein sequence
MTTAKLLVVA AVIGTVGTTQ ALAACEIADA KLEEAIQENP RFRGPANSQA VRDLRSLRDA 
AFTLRSYGRH DDCERLLANI RELIAGPPMG SLGDNDEEQA DIQNSAREPK SRRGTPAGSR
DDKDAKPLIR IDQLTPGLRT DEMIGAEVRS SDDKIVGEVR NIVFGTKDGR DYAIIASGGF
FTTGKDSIVV PIRSLKVTQD RSSFFLPIVK DVMETVPVMP DQDYNWLSDP KWRARNDAFF
EKP