| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0490 |
|---|
| Symbol | |
|---|
| ID | 3909835 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | + |
|---|
| Start bp | 549524 |
|---|
| End bp | 550597 |
|---|
| Gene Length | 1074 bp |
|---|
| Protein Length | 357 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637882377 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_484112 |
|---|
| Protein GI | 86747616 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0400] Predicted esterase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.637254 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGATG CCGTGGTCGA CGACATCGTG GCGCTGCTGC CGCCGCTGCT GCGATCGATC
GAGGCGCTGG ACTTCGTCGC GCGCTATCTG CACCCGCCGG ATTTCGGCGA GGTGATGCGG
CTCGCCGGCG AGCCCGAGAC GGAGCTGCGC GCCGCGCTGC CGCGGCTGGC GGCCTGGCCG
GACACGTTCG CGCATCTGCG CGAGCCGCTG AAGCTCGCGG GCGATCATGT GGTCGCGGCG
TTCGACGGGC TGCGCGCGGT CGACGGCGGC GACGGCGACC TCGTCGCGGT GTTCCGGGCG
CTGCGCCATC TACCGCAGGC GCTTGAGGCG CTGTATCCGC TGGCGGCGAC GCTGCCGCCG
CTGTCGGGGC TGTATCTCGA CCCCGAGCTG CGCGCGGACG ATGCCGTGCT CGCCCGGCTG
GCGCAGCCGA AGCATCCCGA CAGCGGCGTG TTCCACTTCG ACAATGAGCC GGGCAGCCGC
GGCGGGTTCT CGTTCTACGT GCCGGAGGAC TACACGCCGG ACCGCGCCTG GCCGCTGGTG
GTGGCGCTGC ATGGCGGCAG CGGCCACGGC CGGCTGTTCC TGTGGAGCTG GCTGCGCGAC
GCCCGCAGCC GCGGCGCCAT CGTGGTGGCG CCGACCGCGA TCGGGCGGAC CTGGGCGCTG
ATGGGCGAGG ACGCCGACAC GCCGAACCTC GCCCGCATCG TCGACTTCAT CGGCTCGCGC
TGGTCGGTCG ATCCGCGGCG GCGGCTGGTC ACCGGGCTGA GCGACGGCGG CACCTTCTGC
TACGTCACCG GGCTGGAGCG CGAATCCCCC TTCACGCATC TGGCGCCGAT CGCCGCGAGC
TTCCATCCGC TGCTGGCCGG CATGGCCGAT CCGGAGCGGC TGCGCGGGCT GCCGATCCAG
ATCGTGCATG GCCGGCACGA CTGGATGTTC CCGGTCGAAC TGGCGCGGCA GGCGCAACAG
GCGCTATCCG CCGCCGGCGC CGATGTCGGC TATCGCGAGA TCGACGATCT CAGCCACACT
TATCCGCGCG AGATCAACGC GGCGTTGCTG GACTGGCTGG GTAAGGCGGA CTGA
|
|---|
| Protein sequence | MSDAVVDDIV ALLPPLLRSI EALDFVARYL HPPDFGEVMR LAGEPETELR AALPRLAAWP
DTFAHLREPL KLAGDHVVAA FDGLRAVDGG DGDLVAVFRA LRHLPQALEA LYPLAATLPP
LSGLYLDPEL RADDAVLARL AQPKHPDSGV FHFDNEPGSR GGFSFYVPED YTPDRAWPLV
VALHGGSGHG RLFLWSWLRD ARSRGAIVVA PTAIGRTWAL MGEDADTPNL ARIVDFIGSR
WSVDPRRRLV TGLSDGGTFC YVTGLERESP FTHLAPIAAS FHPLLAGMAD PERLRGLPIQ
IVHGRHDWMF PVELARQAQQ ALSAAGADVG YREIDDLSHT YPREINAALL DWLGKAD
|
|---|
| |