| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0487 |
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| Symbol | |
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| ID | 3909832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 545176 |
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| End bp | 545835 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637882374 |
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| Product | anti-sigm factor, ChrR |
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| Protein accession | YP_484109 |
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| Protein GI | 86747613 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3806] Anti-sigma factor |
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| TIGRFAM ID | [TIGR02451] anti-sigma factor, putative, ChrR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.221511 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGTGC GGCATCACAT CGGCGACGAT CTGCTGCTGA GCTACGCGGC CGGCACGCTG
GACGAAGCCT CGAGCCTGCT GGTCGCCACC CATCTCGCGC TGTGCCCGGC CTGCCGCGCC
CGTGCGGCGG CGGCGGACGA CCTCGGCGGC GCGCTGCTCG ACGCCTTGCC GGCGGCGGAG
TTGTCGCCCG GGCTGCACGA CGCCGTGCTG GCGCGGCTCC GCGCCGAACC CCTGGCGGCG
CCGGCGCCGG CGACGCCGCT GCGGCCGCGC TCCGAGATCG TGATTCCGGA GCCGCTGCGC
AGCTATCTCG GCGGTGATTT CGAGACACTG CGCTGGACCA AGCTCGCGCC TCGGGTACAC
CAGATCGCGA TCGACCTTCC GAACTGCCGG CCGCGCGCGC GGCTGCTGCG GTTTCAGGCC
GGCACCCGGG TGCCGGCGCA CAGTCATGCC GGCCGCGAAC TGACGCTGGT GCTGAGCGGC
AGCCTGTGTG ACCGCGACGC GGTGCTGGCG CGCGGCGACG TCGCCGAGAC CGACGAGCAC
ACCGAGCATC AGCCCCACGC CGGGCCCGGC GACGACTGCA TCTGCCTCGC CGTCACCGAC
GCGCCGCTGA GGTTCAAGGG CGTTTTGGCC CGGCTGCTGC AGCCCTGGTT CGGGATCTAG
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| Protein sequence | MTVRHHIGDD LLLSYAAGTL DEASSLLVAT HLALCPACRA RAAAADDLGG ALLDALPAAE
LSPGLHDAVL ARLRAEPLAA PAPATPLRPR SEIVIPEPLR SYLGGDFETL RWTKLAPRVH
QIAIDLPNCR PRARLLRFQA GTRVPAHSHA GRELTLVLSG SLCDRDAVLA RGDVAETDEH
TEHQPHAGPG DDCICLAVTD APLRFKGVLA RLLQPWFGI
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