Gene RPB_0476 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0476 
Symbol 
ID3909821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp524269 
End bp525261 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content73% 
IMG OID637882363 
ProductAlpha/beta hydrolase 
Protein accessionYP_484098 
Protein GI86747602 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID[TIGR03056] putative magnesium chelatase accessory protein 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCCGGC GATGGTGCCA TCGGCGCAAC AACGAGAACA ATGCGATGAT GCGCGCGCTC 
AACGACAACG CCCCTCCGCC TCGCTCGCCG CTCGCCAAGC CGCGCTGGGA CATCGAGGGG
CGCGACTGGC CCAATCGCGA CGCCAGTCGG TTCGTGCACG CCGCGGGGCT GCGCTGGCAC
GTGCAGGAGA GCGGTCGCGG TCCGGTGCTG TTGCTGATCC ACGGCACAAG CGCGGCGACG
CATTCCTGGC GCAGGCTGGC GCCGCTGCTG GCGGAGCCCT TCACCGTCGT CGCGCCCGAT
CTGCCCGGCC ACGGCTTCAC CGAAACGCCG GCGGCGGCGC GCATGACGCT CGACGCGATG
GCGCAGGATC TCGCGACGCT GCTGCGCGGG CTCGATCACG CGCCGGCTGT GGTCGCCGGC
CATTCCGCCG GCGCCGCACT GCTGGCGCGG ATGTGCCTCG ACGGCAGCAT CGCGCCGGCC
GGCCTCGTCG CCCTCAACGG CGCGCTGCTG CCGATCGGCG GCGCGGCGGG GCGGGTCATG
CTGCCGCTGG CGCGGCTGCT GGCGTCGAGC GCGCTGGTGC CGCGGCTGCT GGCGCGGTTC
GCCGGCAATC CGGGCATGGT CGAGCGGATG CTGGCCGACA CCGGCTCGTC GATCGAGCCT
GAAGGGATCG ACTATTATCG CCGGCTGGTC CGCAGCCCCG GCCATGTCGC TGCGGCGCTG
CGGATGATGG CGAGCTGGCG GCTCGAACGA ACCGCGCAGC AATTGCCGCA GCTGGCGACC
CGGCTGCTGC TGATCGCCGG CAGCAACGAC AAGACCATCG CGGCCAGCAA TTCCGCCCGG
GTGCAACGTA TGGTGCCGGG CGCCGGCATC GCGGTGATGC CGGGCCTCGG CCATCTGGCG
CATGAGGAGC GGCCGCACGA CGTCCGCGAC ATCATGGTCG AATTCGCCCG CGACGCCGGC
CTGCTGCCGC GATCGCTCGC GGCGGCAGAG TGA
 
Protein sequence
MRRRWCHRRN NENNAMMRAL NDNAPPPRSP LAKPRWDIEG RDWPNRDASR FVHAAGLRWH 
VQESGRGPVL LLIHGTSAAT HSWRRLAPLL AEPFTVVAPD LPGHGFTETP AAARMTLDAM
AQDLATLLRG LDHAPAVVAG HSAGAALLAR MCLDGSIAPA GLVALNGALL PIGGAAGRVM
LPLARLLASS ALVPRLLARF AGNPGMVERM LADTGSSIEP EGIDYYRRLV RSPGHVAAAL
RMMASWRLER TAQQLPQLAT RLLLIAGSND KTIAASNSAR VQRMVPGAGI AVMPGLGHLA
HEERPHDVRD IMVEFARDAG LLPRSLAAAE