Gene RPB_0415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0415 
Symbol 
ID3908853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp458905 
End bp460443 
Gene Length1539 bp 
Protein Length512 aa 
Translation table11 
GC content71% 
IMG OID637882301 
ProductMg chelatase-related protein 
Protein accessionYP_484037 
Protein GI86747541 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0606] Predicted ATPase with chaperone activity 
TIGRFAM ID[TIGR00368] Mg chelatase-related protein 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.189612 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTCAGC ACGTGTCCAC GGTGGCTTTC GAAGGCATCG ACGCGCGCGC GGTCGATGTC 
CAGGTCCAGG TCTCGCCCGG GCTGCCGGCC TTCGCCGTCG TCGGCCTCGC CGACAAGGCG
GTGTCGGAAG CCCGCGAGCG GGTTCGCTCG GCGCTGATCG CCTCGGGCCT GGCGCTGCCG
GCACGACGCA TCACGGTCAA TCTCGCGCCC GCCGATCTGC CGAAGGAAGG CAGCCATTAC
GACCTGCCGA TCGCGCTCGG GCTGATGGCG GCGATCGGCG CCATCCCCGG CGACGCGCTG
GCGGGATTCA CCGTGCTGGG CGAACTCGGC CTCGACGGCT CGATCGCGCC GGTGGCCGGC
GTGCTGCCGG CCGCGATCGC CGCCAACGCC CGCGACGAGG GCCTGATCTG CCCGGCGGCC
TGCGGCTCCG AGGCGGCCTG GGCGAGCCCC GACATCCAGA TCATCGCGGC CCGGTCGCTG
ATCCAGATCG CCAATCATTT CAAAGGGACG CAGCTTCTCA GCCGGCCGCA GCCGCGGGTC
CACGAGGCCG AGAGTTCGAC CCTCGACCTG CGCGACATCA AGGGCCAGGA GAGCGCCAAG
CGCGCGCTGG AGATCGCCGC CGCAGGCGGT CACCATCTGC TGATGGTGGG GTCGCCCGGC
GCGGGCAAGT CGATGCTGGC GGCGCGGCTG CCGTCGATCC TGCCGCCACT GTCCCCGGCC
GAATTGCTCG AAGTCTCGAT GATCGCCTCG GTCGCCGGCG AGATCCGCGA CGGCGCTTTG
ACGGCGAAGC GCCCGTTCCG CGCGCCACAC CATTCCGCCA GCATGGCGGC GCTGACCGGC
GGAGGCATCA AGGCGCGACC CGGTGAGATT TCGCTGGCGC ATCAGGGCGT GCTGTTCCTG
GACGAACTCC CCGAATTCGA TCCCCGCGTT CTGGATTCGT TGCGGGCGCC GCTCGAAACC
GGCGAAGTCG CGGTGTCGCG TGCCAACCAT CGCGTCACCT ACCCGGCCCG GGTCATGTTG
GTCGCGGCGA TGAACCCGTG CCGCTGCGGC CGCGCCTACG AACCGGGCTA TGCCTGCAAG
CGCGGGCGGG TCGAGCGCTG CAGTGCGGAC TATCAATCCC GCATTTCCGG GCCACTGCTG
GATCGGATCG ACCTGCGGAT CGAGGTGCCC GCGGTCACCG CCGCCGATCT GATCCTGCCG
CCTGCGGCGG AAGGCTCCGC CGAAGTGGCG GCGCGGGTTG CCGCCGCGCG CGACGTGCAG
CGGCAACGCT ATGCCGCGAT CGGGCTACCG CAATTCCGCA CCAATGCCGA GGCGCCGGCC
GCCGCGCTGG AAGCCACCGC CCAGCCGGAT TCCGCCGGGC TGAAGCTGCT GCGCGACGCG
GCCGAGACCA TGCGGCTGTC GGCGCGCGGC TATCATCGCG TCCTCCGCGT CGCCCGCACC
CTCGCCGACC TCGACGGCGC CGACAAGATC GGCCGGCTGC ATCTGGCCGA AGCGCTGTCC
TATCGCGCGC TGGGAGAGGA CGTCAGACGC GCCGCCTGA
 
Protein sequence
MVQHVSTVAF EGIDARAVDV QVQVSPGLPA FAVVGLADKA VSEARERVRS ALIASGLALP 
ARRITVNLAP ADLPKEGSHY DLPIALGLMA AIGAIPGDAL AGFTVLGELG LDGSIAPVAG
VLPAAIAANA RDEGLICPAA CGSEAAWASP DIQIIAARSL IQIANHFKGT QLLSRPQPRV
HEAESSTLDL RDIKGQESAK RALEIAAAGG HHLLMVGSPG AGKSMLAARL PSILPPLSPA
ELLEVSMIAS VAGEIRDGAL TAKRPFRAPH HSASMAALTG GGIKARPGEI SLAHQGVLFL
DELPEFDPRV LDSLRAPLET GEVAVSRANH RVTYPARVML VAAMNPCRCG RAYEPGYACK
RGRVERCSAD YQSRISGPLL DRIDLRIEVP AVTAADLILP PAAEGSAEVA ARVAAARDVQ
RQRYAAIGLP QFRTNAEAPA AALEATAQPD SAGLKLLRDA AETMRLSARG YHRVLRVART
LADLDGADKI GRLHLAEALS YRALGEDVRR AA