Gene RPB_0388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0388 
Symbol 
ID3908826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp431056 
End bp431946 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content68% 
IMG OID637882274 
ProductparB-like partition proteins 
Protein accessionYP_484010 
Protein GI86747514 
COG category[K] Transcription 
COG ID[COG1475] Predicted transcriptional regulators 
TIGRFAM ID[TIGR00180] ParB-like partition proteins 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.450209 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGACG AGCACCGTTC GCGACTGGGG CGGGGGCTGG CGAGTCTGAT CGGGGACGTC 
GGCGGCGAGG CCGCGCATGT CGAGCGGCCG CGCGCGCAGC GCAAGGTGCC GATCGAATTC
ATCAAGGCCA ATCCGCGCAA CCCGCGCCGC AGCTTCACCG ATGCCGAGCT CGGCGAATTG
TCGGATTCGA TCAAGCAGCA CGGCGTGATC CAGCCGATCG TGGTGCGGCC CGTGAAGGGC
ACGAACGACC GCTTCGAGAT CATCGCCGGC GAACGGCGCT GGCGCGCGGC GCAGCGCGCC
GGCCTGCACG AAGTGCCGAT CGTGCCGGTC GATGTCAGCG ATGCGCTGGC GCTCGAGATC
GCCATCGTCG AAAACGTGCA GCGCGAGAAT CTCAATCCGC TGGAAGAGGC GCAGGGCTAT
CACGCGCTCG CCAACGAATT CAAACGCAGC CAGGACGAGA TCGCGAAAAT CGTCGGCAAG
AGCCGCAGCC ACGTCGCCAA CATGATGCGG CTGACCAAGC TGCCCGACGA CGTGCTCGAG
CTGATCGCGG CCGGACAACT ATCTGCCGGC CATGCGCGCG CGCTGATCGG CGTGCCCGAT
CCGTCGGCGG CGGCCAAGCG CATCGTCGCC GAGGGCCTCA ACGTCCGGCA GACCGAAGCG
CTGGCCCACG ACGAAGGCGT GCCGGAACGC AAGCCGCAGA AGCCGCGCGC GTCTGCGAGC
GCGAAGCCGG CCAAGGACGC CGACACGCTG GCGCTGGAAA AACGCGTCAG CGACGCGCTC
GGCATGAAGG TGACGATCGA CGACCGCGAC GGCACCGGCT CGCTGCAGAT CCGCTACGCC
GATCTCGACC AGCTCGACGA CATCATCCGC AGGCTCGAGG CGGGCGGTTA G
 
Protein sequence
MADEHRSRLG RGLASLIGDV GGEAAHVERP RAQRKVPIEF IKANPRNPRR SFTDAELGEL 
SDSIKQHGVI QPIVVRPVKG TNDRFEIIAG ERRWRAAQRA GLHEVPIVPV DVSDALALEI
AIVENVQREN LNPLEEAQGY HALANEFKRS QDEIAKIVGK SRSHVANMMR LTKLPDDVLE
LIAAGQLSAG HARALIGVPD PSAAAKRIVA EGLNVRQTEA LAHDEGVPER KPQKPRASAS
AKPAKDADTL ALEKRVSDAL GMKVTIDDRD GTGSLQIRYA DLDQLDDIIR RLEAGG