Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0388 |
Symbol | |
ID | 3908826 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 431056 |
End bp | 431946 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637882274 |
Product | parB-like partition proteins |
Protein accession | YP_484010 |
Protein GI | 86747514 |
COG category | [K] Transcription |
COG ID | [COG1475] Predicted transcriptional regulators |
TIGRFAM ID | [TIGR00180] ParB-like partition proteins |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.450209 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCGACG AGCACCGTTC GCGACTGGGG CGGGGGCTGG CGAGTCTGAT CGGGGACGTC GGCGGCGAGG CCGCGCATGT CGAGCGGCCG CGCGCGCAGC GCAAGGTGCC GATCGAATTC ATCAAGGCCA ATCCGCGCAA CCCGCGCCGC AGCTTCACCG ATGCCGAGCT CGGCGAATTG TCGGATTCGA TCAAGCAGCA CGGCGTGATC CAGCCGATCG TGGTGCGGCC CGTGAAGGGC ACGAACGACC GCTTCGAGAT CATCGCCGGC GAACGGCGCT GGCGCGCGGC GCAGCGCGCC GGCCTGCACG AAGTGCCGAT CGTGCCGGTC GATGTCAGCG ATGCGCTGGC GCTCGAGATC GCCATCGTCG AAAACGTGCA GCGCGAGAAT CTCAATCCGC TGGAAGAGGC GCAGGGCTAT CACGCGCTCG CCAACGAATT CAAACGCAGC CAGGACGAGA TCGCGAAAAT CGTCGGCAAG AGCCGCAGCC ACGTCGCCAA CATGATGCGG CTGACCAAGC TGCCCGACGA CGTGCTCGAG CTGATCGCGG CCGGACAACT ATCTGCCGGC CATGCGCGCG CGCTGATCGG CGTGCCCGAT CCGTCGGCGG CGGCCAAGCG CATCGTCGCC GAGGGCCTCA ACGTCCGGCA GACCGAAGCG CTGGCCCACG ACGAAGGCGT GCCGGAACGC AAGCCGCAGA AGCCGCGCGC GTCTGCGAGC GCGAAGCCGG CCAAGGACGC CGACACGCTG GCGCTGGAAA AACGCGTCAG CGACGCGCTC GGCATGAAGG TGACGATCGA CGACCGCGAC GGCACCGGCT CGCTGCAGAT CCGCTACGCC GATCTCGACC AGCTCGACGA CATCATCCGC AGGCTCGAGG CGGGCGGTTA G
|
Protein sequence | MADEHRSRLG RGLASLIGDV GGEAAHVERP RAQRKVPIEF IKANPRNPRR SFTDAELGEL SDSIKQHGVI QPIVVRPVKG TNDRFEIIAG ERRWRAAQRA GLHEVPIVPV DVSDALALEI AIVENVQREN LNPLEEAQGY HALANEFKRS QDEIAKIVGK SRSHVANMMR LTKLPDDVLE LIAAGQLSAG HARALIGVPD PSAAAKRIVA EGLNVRQTEA LAHDEGVPER KPQKPRASAS AKPAKDADTL ALEKRVSDAL GMKVTIDDRD GTGSLQIRYA DLDQLDDIIR RLEAGG
|
| |