| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0351 |
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| Symbol | rimM |
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| ID | 3908617 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 394275 |
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| End bp | 394823 |
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| Gene Length | 549 bp |
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| Protein Length | 182 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637882237 |
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| Product | 16S rRNA-processing protein RimM |
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| Protein accession | YP_483973 |
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| Protein GI | 86747477 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0806] RimM protein, required for 16S rRNA processing |
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| TIGRFAM ID | [TIGR02273] 16S rRNA processing protein RimM |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTCCG GGCCGATTTC CGTCGCCCGG CAAGTCTGCG TCGCGCGAAT CGGCGCGCCG
CACGGCGTGC GCGGCGCGAT GCGGCTGTGG AGCTTCACCG CCGATCCGCT CGCCGTCGGC
GACTACGGCC CGCTGTCGAC CAAGGACGGC ACACGCTCGT TCGAGATCGC CACCGCGCGC
GCCGCCAAGG ATCATCTGGT GGTGACGCTG AAGGGCGTCA CCACGCGCGA CGAGGCGGTG
CGCCTCAACG GCCTCGAACT GTATGTGCCG CGCGACGCCC TGCCGCCGAC CGAGGACGAC
GAGTACTATC ACGCCGACCT GATCGGCCTG CCGGCGATCA CGACGTCCGG CGAGCCGCTC
GGCCGCGTGC TGGCGATCCA CAATTTCGGC GCCGGCGACA TCATCGAGAT CGCGCCGGCT
TCCGGCCCGA CGCTGCTGCT GCCGTTCACC AACGCGGTGG TGCCGACGGT CGACCTCGCC
GCCGGGCAGG TGATCATCGA ACTGCCCGCC GAGATCGAGG GCGACACGCC GAACCATCCG
GAGGCGTGA
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| Protein sequence | MPSGPISVAR QVCVARIGAP HGVRGAMRLW SFTADPLAVG DYGPLSTKDG TRSFEIATAR
AAKDHLVVTL KGVTTRDEAV RLNGLELYVP RDALPPTEDD EYYHADLIGL PAITTSGEPL
GRVLAIHNFG AGDIIEIAPA SGPTLLLPFT NAVVPTVDLA AGQVIIELPA EIEGDTPNHP
EA
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