Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0307 |
Symbol | |
ID | 3908686 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 348038 |
End bp | 348919 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637882191 |
Product | ABC transporter related |
Protein accession | YP_483929 |
Protein GI | 86747433 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.233067 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGGCAT TTCAACCCAA AAAGGCCTGG CCCGGGGCGC ATATCGCCAT CCAGGGCGTC AGTCACCGCT ACCGCCGCGC GAGCGGCAAC GCGCTGAGCG GCATCGATCT CGAGATCAAG CCCTGCGAGG CGGTGGCGCT GGTCGGGCGC TCCGGCTGCG GCAAGTCGAC CTTGCTGCAC ATCATCGCCG GACTGGTCGC GCCGAGCATG GGCGAGATCC GCATCGACGG CGCCAGGGTC GAGGGCGCAT CGCCGCGCTG GGTCGTGATG TTCCAGCAGC CGCATCTGTA TCCGTGGATG AGCGTGGCGC AGAATGTCGG GCTCGGGCTG AAATTCGCCG GCCGCCCGCG CGCGGAGATC GCCGCGCGGG TCGGCGAATT GCTGCATCTC GTCGAACTCG ACGGCTACGC CGAGCGCAAC GCGCAGGACC TGTCCGGCGG CCAGCAGCAG CGCGTCGCGC TGGCGCGCTC GCTCGCGACC TGCCCGGAAG TGCTGCTGCT GGACGAGCCG TTCTCCGCCC TCGACGCCGT CACCCGCCGC GCCTTGCAGC GCGACGTCCG CCGCATCGCC GAGGAAATGA AGATCACGCT GGTGATCGTC ACCCACGACA TTCCGGAAGC GGTGACGATG GCGGATCGCG CGGTGATCAT GCGGTCCGAC CCCGGCCGCA TCGCCGAGAT CGTGCCGGTC GCGGTCGATC GCAGCGACGC CGATCCGGAG CGCCGGGCGG CCAGCATCCA GGCCGCGCAG GCGCGGCTGC AGGCGGCGTT CGAACGCGCC ACCGGCCCGG CCGCGCCGGA CGCATCGCTG ACTCCCGACT CCCACAACCA AGAAACGCCA CGGACGGAAC CGCTCAAGAT CGTCGCTGCC GGCCACCGCT GA
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Protein sequence | MPAFQPKKAW PGAHIAIQGV SHRYRRASGN ALSGIDLEIK PCEAVALVGR SGCGKSTLLH IIAGLVAPSM GEIRIDGARV EGASPRWVVM FQQPHLYPWM SVAQNVGLGL KFAGRPRAEI AARVGELLHL VELDGYAERN AQDLSGGQQQ RVALARSLAT CPEVLLLDEP FSALDAVTRR ALQRDVRRIA EEMKITLVIV THDIPEAVTM ADRAVIMRSD PGRIAEIVPV AVDRSDADPE RRAASIQAAQ ARLQAAFERA TGPAAPDASL TPDSHNQETP RTEPLKIVAA GHR
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