Gene RPB_0307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0307 
Symbol 
ID3908686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp348038 
End bp348919 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content71% 
IMG OID637882191 
ProductABC transporter related 
Protein accessionYP_483929 
Protein GI86747433 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.233067 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGCAT TTCAACCCAA AAAGGCCTGG CCCGGGGCGC ATATCGCCAT CCAGGGCGTC 
AGTCACCGCT ACCGCCGCGC GAGCGGCAAC GCGCTGAGCG GCATCGATCT CGAGATCAAG
CCCTGCGAGG CGGTGGCGCT GGTCGGGCGC TCCGGCTGCG GCAAGTCGAC CTTGCTGCAC
ATCATCGCCG GACTGGTCGC GCCGAGCATG GGCGAGATCC GCATCGACGG CGCCAGGGTC
GAGGGCGCAT CGCCGCGCTG GGTCGTGATG TTCCAGCAGC CGCATCTGTA TCCGTGGATG
AGCGTGGCGC AGAATGTCGG GCTCGGGCTG AAATTCGCCG GCCGCCCGCG CGCGGAGATC
GCCGCGCGGG TCGGCGAATT GCTGCATCTC GTCGAACTCG ACGGCTACGC CGAGCGCAAC
GCGCAGGACC TGTCCGGCGG CCAGCAGCAG CGCGTCGCGC TGGCGCGCTC GCTCGCGACC
TGCCCGGAAG TGCTGCTGCT GGACGAGCCG TTCTCCGCCC TCGACGCCGT CACCCGCCGC
GCCTTGCAGC GCGACGTCCG CCGCATCGCC GAGGAAATGA AGATCACGCT GGTGATCGTC
ACCCACGACA TTCCGGAAGC GGTGACGATG GCGGATCGCG CGGTGATCAT GCGGTCCGAC
CCCGGCCGCA TCGCCGAGAT CGTGCCGGTC GCGGTCGATC GCAGCGACGC CGATCCGGAG
CGCCGGGCGG CCAGCATCCA GGCCGCGCAG GCGCGGCTGC AGGCGGCGTT CGAACGCGCC
ACCGGCCCGG CCGCGCCGGA CGCATCGCTG ACTCCCGACT CCCACAACCA AGAAACGCCA
CGGACGGAAC CGCTCAAGAT CGTCGCTGCC GGCCACCGCT GA
 
Protein sequence
MPAFQPKKAW PGAHIAIQGV SHRYRRASGN ALSGIDLEIK PCEAVALVGR SGCGKSTLLH 
IIAGLVAPSM GEIRIDGARV EGASPRWVVM FQQPHLYPWM SVAQNVGLGL KFAGRPRAEI
AARVGELLHL VELDGYAERN AQDLSGGQQQ RVALARSLAT CPEVLLLDEP FSALDAVTRR
ALQRDVRRIA EEMKITLVIV THDIPEAVTM ADRAVIMRSD PGRIAEIVPV AVDRSDADPE
RRAASIQAAQ ARLQAAFERA TGPAAPDASL TPDSHNQETP RTEPLKIVAA GHR