Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0271 |
Symbol | xerC |
ID | 3907899 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 306126 |
End bp | 307181 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637882154 |
Product | site-specific tyrosine recombinase XerC |
Protein accession | YP_483893 |
Protein GI | 86747397 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.28022 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.462537 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGGCG CTTCTGGATT GCTTCGCTTT GCTCGCAATG ACGGAGAGGA TCTCGTTTCA GTCGGCATCC GGCATAAGCA CCACATGGCC AAATCACAGC CCATGCCCCC TCCGATCGAC CTGCCTTGCG CCGCCGCCGA TCTCAACGCG GAATTCACCC GCTGGCTGTC GCATCTGCGC GCCGAGCGCC GGCTGTCCGG CAAGACGCTG GAGGCCTATG CGCGCGACCT GCGCCAGTTT CTGTTTTTTC TCGCCGGCCA TTGGGGCGGC GAGGTGACGC TCGGCCGCTT CGCGCGACTG GAAACAACCG ACGTGCGCGC CTTCATGGCG GCGCGGCGCG GCGATGCGAT CGCCGGCCGC TCGCTGATGC GGGCGCTGGC CGGGCTGCGC TCGTTCGGCC GCTTCCTCGA ACGCGAGGGC AAGGGCAGCG TCGGCGCGCT GTCGGCGGTG CGGGCGCCGA AGATCAAGAA GAGCCTGCCG AAGCCGATCC AGATCGCCGC CGCCAAGCGG CTGGCGGACG CCGACGAGCG CGCCGGCGAG GATCGCGAGA CCTGGGTGCT GGTTCGCGAC GCCGCCGTGA TGGCGTTGCT GTACGGCTCC GGCCTGCGCA TCTCCGAAGC GCTCGGGCTG AAGCGTCGCG ACGTACCGGC GCCGGGCAAG GGCGACACCC TGATCGTACT CGGCAAGGGC AACAAGACCC GGATGGTGCC GGTGCTCGAC GCCGTGCTGG CGCAGATCGC CGACTACGCG AAAGCCTGCC CGCATCCGCT GCCGCCGGAC GGGCCGATGT TCGTCGGCGC GCGCGGCGGG CCGCTCAGCC CGCGAATCAT CCAGCTGGCG ATGGAGCGGC TGCGCGGCGC GCTTGGACTG CCGGATTCGG CCACCCCGCA CGCGCTGCGG CACTCTTTCG CGACGCATCT TCTGAGCCGC GGCGGCGATT TGCGCGCGAT CCAGGAATTG CTCGGCCACG CCTCGCTGTC GACCACGCAG ATTTATACCG GCATCGACAC CGAGCGGCTG CTGGAAGTCT ACGCCAGCGC CCATCCGCGC GCGTGA
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Protein sequence | MPGASGLLRF ARNDGEDLVS VGIRHKHHMA KSQPMPPPID LPCAAADLNA EFTRWLSHLR AERRLSGKTL EAYARDLRQF LFFLAGHWGG EVTLGRFARL ETTDVRAFMA ARRGDAIAGR SLMRALAGLR SFGRFLEREG KGSVGALSAV RAPKIKKSLP KPIQIAAAKR LADADERAGE DRETWVLVRD AAVMALLYGS GLRISEALGL KRRDVPAPGK GDTLIVLGKG NKTRMVPVLD AVLAQIADYA KACPHPLPPD GPMFVGARGG PLSPRIIQLA MERLRGALGL PDSATPHALR HSFATHLLSR GGDLRAIQEL LGHASLSTTQ IYTGIDTERL LEVYASAHPR A
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